Deinococcus radiophilus: LMT64_04740
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Entry
LMT64_04740 CDS
T07688
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
drd
Deinococcus radiophilus
Pathway
drd03030
DNA replication
drd03410
Base excision repair
drd03420
Nucleotide excision repair
drd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMT64_04740 (polA)
03410 Base excision repair
LMT64_04740 (polA)
03420 Nucleotide excision repair
LMT64_04740 (polA)
03440 Homologous recombination
LMT64_04740 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drd03032
]
LMT64_04740 (polA)
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_04740 (polA)
Enzymes [BR:
drd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMT64_04740 (polA)
DNA replication proteins [BR:
drd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LMT64_04740 (polA)
DNA repair and recombination proteins [BR:
drd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LMT64_04740 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMT64_04740 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
UFA51207
LinkDB
All DBs
Position
915434..918085
Genome browser
AA seq
883 aa
AA seq
DB search
MSSSNSASQPDTLVLIDGHALAYRSYFALPPLSNSRGESTHAIVGFLRQALRLARQKGNQ
LVVVFDPPVKTFRHEQYEDYKSGRAETPSDLPPQINRIRQLVDALGWPRLEVGGYEADDV
IGTLTQRGRAEGMQVRILTSDRDAYQLLADDVRVIKNDNSLFGPQDVLDKYGVTVDQWVD
FRALTGDASDNIPGAKGIGPKTATKILQEYGTLDAALAAAKAGELKPVGTQKKLVESEEA
VLFSRELSQMVCDLELDCELRAGRGVGDPARLNELLEELELDSLRTDIGRLLAGEMERAP
APAAEVQVARFTAPQSGTWQAPQREAVWGYRLSREDDLTAELRGAAWLDGDTARAVPELE
AAPNLFELETAQAPKKRGKAKEPQPLADLDVLTGAIQGHELDAAGAKALAAWLAVRGKEV
APGDDPLLMAYLLDPANTAMPTVAQRYLNTEWPDDAGMRAGITARLLEVLPEQLDEPRRK
LYGEVEKPLSGVLARMEARGVRLDSEYLTGLSLAIAERIQRLEGQIHELAGREFSIRSRD
QLEAVLYDELGLASGKKTKLTGKRSTAVSALEPLRDEHPIIPLLLEYRELEKLRGTYLDP
LPRLVNPTTGRLHTTFAQTAVATGRLSSLNPNLQNIPIRSEEGRQIRKGFVADDGYCLVA
ADYSQLELRLMAHIAGDAPMQQAFRDGADIHRRTAAQVLGLDEATVDANQRRAAKTVNFG
VLYGMSAHRLSNELGIPYAEAAGFIENYFGIYPGIQEYIDGTLEFGRQHGYVETLYGRRR
YVPELTARNRNLREAGERLAYNMPIQGTAADIMKMAMVALEPRLDALGARMLLQVHDELL
IESPQEKAEEVAALTREVMENVVTLEVPLATEVGISDNWYETK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatccaattccgcctcgcagcctgacacgctggtgctgattgacggtcacgcg
ctggcctaccgctcatattttgccctgccgcccctgagcaactcgcgcggcgaaagtacc
catgccatcgtcggatttttgcgtcaagcgctgcggctggcccggcaaaagggcaatcag
ctggtggtggtctttgatccaccagtcaaaactttccggcatgagcagtacgaggactac
aagtcgggccgcgccgagactcccagcgacttgcccccgcagatcaaccgcatccgtcaa
ctggtggacgccctgggctggccccggctggaagttggtggctacgaggcagatgatgtg
atcggcacactgacccagcgcggacgggccgagggaatgcaggtccgcatcctgacttcg
gaccgcgacgcttatcaactgctggcggacgatgtacgcgtcatcaaaaacgacaactcg
ctgtttgggccgcaggacgtgctggacaaatacggcgtgacggtagaccagtgggtggac
ttccgggcgctgactggggacgccagcgacaatattccgggcgccaaaggcatcggcccc
aagacggccaccaagattttgcaggagtacggcacgctggacgcggccctggccgccgcc
aaagccggcgagctgaaacccgtcggcacgcagaaaaaactggtggagagcgaggaagcg
gtgctgttcagccgtgagctgtcgcagatggtctgtgacctggagctggactgtgaactg
cgggctgggcgcggcgtaggcgacccggcgcggctgaacgaactgctggaagaactggaa
ctggactcgctgcgaaccgacatcgggcggctgctggccggggaaatggaaagggctcct
gcaccagcggctgaggtgcaagtggcgagattcactgcgccacagtccggcacttggcaa
gcaccccagcgcgaggccgtgtggggttaccgcctaagccgcgaggacgacctgaccgcc
gagctgcgcggcgcggcctggttggacggcgatacggcccgcgccgtgccggagctggaa
gcagcccccaacctgttcgagctggaaaccgcacaggccccgaagaagcggggcaaggcc
aaggaaccgcagccgctggcggaccttgacgttctgaccggggcgattcaggggcatgaa
ctggacgccgccggagccaaggcgctggccgcctggctggccgtgcgcggcaaagaggtc
gcccccggtgacgatccgctgctgatggcctacttgctggacccggccaacaccgccatg
ccgacggtggctcagcgctacctgaacaccgaatggcccgacgacgcaggcatgcgcgcc
gggatcacggcccgactgctggaagtgctgcctgagcaactggatgaacccagacgcaag
ctgtacggcgaagtggaaaagccattgagcggcgtcctggcacgcatggaagcgcggggt
gtacgtctggacagcgagtatctcaccggcctctcgctggcgatcgcggagcggattcag
cggctggaagggcagattcatgagttggcggggcgtgagtttagcattcgcagccgtgac
cagctggaagccgtgctgtacgacgaactgggcctggccagcggcaagaagaccaagctg
accggtaagcggtctactgcggttagcgccctcgaaccgctgcgcgacgaacaccctatc
atcccgctgctgctggaataccgcgagttggaaaagctgcgcggcacttacctggacccc
ctcccacgcctggtcaatcccaccaccgggcggctgcacaccactttcgcccagacggca
gtggcgaccgggcgcctgagcagcctcaaccccaacctccagaacattccgattcgctcg
gaggagggccgccagattcgtaagggcttcgtcgcggatgatgggtattgcctggtcgcc
gccgactactcgcaactcgaactgcggttgatggcccatatcgccggggacgccccgatg
cagcaggctttccgagatggggccgacattcaccgccgcaccgccgcgcaggtgctgggg
ctggatgaggccaccgttgacgccaatcaacgccgcgccgccaagacggtgaatttcggc
gtgctgtacggcatgagcgcccaccgccttagcaatgagctgggcattccttacgctgag
gccgccggatttatcgagaactacttcgggatctatccggggattcaggaatacattgac
gggacgctggagttcgggcggcagcacggctacgtagaaacgctgtatggccgccgccgc
tacgtgccggagctgacggcccggaaccgcaacctgcgcgaagccggcgagcgcctcgcc
tacaacatgccgattcagggcaccgccgccgacatcatgaaaatggcgatggtggcccta
gaaccgcgtctagacgcactgggtgcccggatgctgctccaggttcatgacgaactgctg
atcgaatcgccccaggaaaaggccgaggaagtcgccgcgctgacccgtgaagtgatggaa
aacgtggtgacgctggaggtgccgctggccactgaggtcgggatcagcgataactggtat
gaaaccaagtga
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