Deinococcus radiophilus: LMT64_04830
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Entry
LMT64_04830 CDS
T07688
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drd03016
]
LMT64_04830
Enzymes [BR:
drd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LMT64_04830
Transfer RNA biogenesis [BR:
drd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LMT64_04830
Prokaryotic type
LMT64_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UFA51223
LinkDB
All DBs
Position
938147..939241
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AA seq
364 aa
AA seq
DB search
MTGLPHAPADPLTFRWSSLARLGGLPPEAGTGGQLRTEPADFVVDELPLYLPQGEGDHLM
IELRKEGHTTGHVLRELARQLRVKDRDIGSAGQKDRHAVTTQWVSVPVKGESRLPHFELS
GVEVLQSARHPNKLGLGHLRGNRFQVRVRGAAGTAQAAQQRLGELTEQGIPNYFGPQRFG
LGGINAAEGLRVLRGESALKDPKLRRFLVSALQSAVFNAYLSRRLERGLFAELLPGDHAK
KHTSGGEFWVDDASESERARAGEVSALGNLFGRKTDPLRGPAGELEREALAGLDLDPAEF
TALRGDTRLTRIFFLEAPLLTPEESGYTVQFTLPRGSFATAVLRELMGGEIDTLPLPEER
HDSA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcctgccccatgctcctgcagatcccctcacctttcgctggtccagtctggcc
cgcctgggcgggttgccgccggaagcggggaccggcgggcaactgcgtactgagcccgcc
gactttgtggtggacgaactgccgctgtacctcccccagggcgaaggcgaccacctgatg
attgagctgcgtaaggagggccataccactggccatgtcctccgtgagctggcgcggcaa
ctgcgcgtcaaggaccgtgacatcgggagcgccgggcaaaaggaccgccacgcggtgacg
acccagtgggtatcggttccagtcaagggggaaagccgcctgccgcacttcgaattgtca
ggcgtagaggtgctgcaatccgcgcggcatcccaacaagctaggtctgggccacttgcgc
ggcaaccgctttcaggtgcgcgtgcgcggcgcggcagggacagcgcaggccgcccagcaa
cgcctgggtgaactgaccgagcagggcatccccaactactttggaccgcagcgcttcggg
ctgggcggcatcaatgcagcggaagggctgcgggtgttgcgcggcgaatcggccctgaaa
gaccccaagctgcggcgctttctggtgtctgcactgcaaagcgccgtattcaacgcttac
ctcagccggcgactggaacgtggcctcttcgctgaactgctgccgggtgatcacgcgaaa
aaacacaccagcggaggcgaattctgggtggacgacgccagcgagtcggagcgggccagg
gcaggcgaggtcagcgcactgggcaatctgttcggacgcaagacggaccccttgcgtggc
ccggcgggcgagctggagcgcgaagccctggcggggctggacctggaccccgccgagttc
acggctctgcgcggcgacacccggctgacccgcatcttttttctggaagcacccctgctg
accccggaagagagcggatacacggtgcagttcaccctgcccagaggcagttttgcgacg
gcggtgctgcgcgaactgatgggaggtgagatcgacaccctcccgctgccggaggaacgc
catgactcagcctga
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