Deinococcus radiophilus: LMT64_05625
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Entry
LMT64_05625 CDS
T07688
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
drd
Deinococcus radiophilus
Pathway
drd03030
DNA replication
drd03430
Mismatch repair
drd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMT64_05625 (holA)
03430 Mismatch repair
LMT64_05625 (holA)
03440 Homologous recombination
LMT64_05625 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drd03032
]
LMT64_05625 (holA)
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_05625 (holA)
Enzymes [BR:
drd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMT64_05625 (holA)
DNA replication proteins [BR:
drd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMT64_05625 (holA)
DNA repair and recombination proteins [BR:
drd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMT64_05625 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UFA51389
LinkDB
All DBs
Position
1103625..1104536
Genome browser
AA seq
303 aa
AA seq
DB search
MMLAAFSGHPFLAELALRDWAEAQGINRAELTRLSGDEVTPETLEPLLAPSLFGGGGVIV
DLSGVKPTRDLMNLLAGAQAPALVLDVTSPATRAKVYEEHGQLIRSPNPQRPGDVLGWLV
PYAKGQGLKLERDAAQYLADVFGNDLTGIASELNKLHFLPPGTRLNAETVQEVVGREQAG
DSFVMLDAATAGRPVPALEQLGRLLRVGEDPFRLLGAVVWQYSLIARCVGLIAQEGGRVS
DAAAAQRLGAKPYPVKKALAVARRLNEAQARRHLGRIAQADLDLKRGHDPARVLQRLMIE
LSG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atcatgctcgcggcgtttagtggacatccttttctggccgagctggccctgcgcgactgg
gccgaggcacagggcatcaaccgcgccgaactgacccgcctgagcggcgacgaggtgacg
cctgaaaccctagagccgctgctggcccccagtctgtttggcggtggcggcgtgatcgtg
gacctgagcggcgtcaaaccgaccagggacctgatgaacctgctggccggtgcccaggcc
ccagccttggtcctggacgttacctctcccgccacccgcgccaaggtgtacgaggaacac
ggccagctgatccgcagccccaacccgcagcgccccggcgatgtgctgggctggctggtg
ccttacgccaagggacagggcctgaagctggaacgagatgccgcgcagtacctggcggat
gtgttcggcaacgatctgacggggatagcaagcgaactcaacaagctccactttctgccg
cccggtacccggctgaatgccgaaaccgtgcaggaggtggtgggccgcgaacaggcaggc
gactcgttcgtcatgctggacgcggccacggctggacgtccggtgccagccttagaacag
ctaggcaggctgctgcgcgtgggcgaagatcctttccggctgctgggtgcggtggtgtgg
cagtacagcctgatcgcccgctgcgtgggcctgatcgcccaggaaggcgggcgggtcagc
gacgccgcagccgcccagcgcctaggggccaagccttacccagtcaaaaaagccctggcg
gtggcccgccgtctgaacgaagcccaggcccgccgccacctgggacgcatcgcccaggcc
gacttggacctcaagcgcggccatgacccggcgcgggtgctccagcggctgatgattgag
ctgagtggctaa
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