Deinococcus radiophilus: LMT64_08120
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Entry
LMT64_08120 CDS
T07688
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drd03016
]
LMT64_08120
Enzymes [BR:
drd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LMT64_08120
Transfer RNA biogenesis [BR:
drd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LMT64_08120
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UFA49855
LinkDB
All DBs
Position
1607658..1609040
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AA seq
460 aa
AA seq
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MEISELSSAQWTDVELTARGKQDKSRTLRDLARPETPESAHALLLEAGRWTEAQTPYAER
LGTALEAVSLPVPEWPDEERLDLTHLSAYAIDDEGNQDPDDALSAEDLGGGLTRLWVHVA
DVAALVPPGSALDLEARARGATLYLPDQTIHMLPEALIAQAGLGLSETSPALSIALDLDE
TGNAEAVEVHLTRVRVQRLSYDQAQAMFASGHKDFARLAELARVSRDIRFEEGAVSIDLP
EVRVKADEAGAQVTALPRPEMRGVVQECMTLAGWGAAIYADDFELPIPFATQDPPHREVS
GDTIPAHWARRKTLGRTRFQSAPGAHAGMGLDLYTQATSPMRRYLDLVVHQQLRAHLSGA
EPMSGREVAAHIAEASIGSAGTRTAERLSRRHHTLRCIAAQPERVWEAVVVERKGPQATL
LIPDLALDLPMTTPSQPGQVLSVTLTVQSLPDLRVRASES
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggagatcagtgaactcagcagcgcccagtggaccgacgtcgaactgaccgcgcgcggc
aaacaggacaaatcgaggaccctgcgtgacctggcacggcccgaaacccccgagagtgcc
catgccctgctgctggaagcaggccgctggaccgaggcccagaccccatatgccgagcgg
ctggggacggccctagaggccgtgagcctgcctgtccccgagtggcctgacgaggaacgg
ctggacctgacccacctgagcgcctacgcgatcgacgatgagggcaaccaggaccccgac
gacgccctgagtgccgaagacctgggcggcggcctgacccggctgtgggtccatgtggcg
gatgtggccgcgctggtcccgccgggcagtgcattggacttggaggcccgtgcacgcggc
gcaaccctttacctgccagaccagaccatccacatgctgcccgaagccttgatcgcccag
gcgggcctgggtctcagcgagaccagcccggccctctctatcgcgctggacctggatgaa
acgggcaatgctgaggcggtagaagttcatctgacccgcgtgcgggtgcagcgcctgagc
tacgaccaggcccaggccatgtttgcaagcgggcataaggacttcgcccgtctggccgaa
ctggcccgtgtcagccgtgacatccgcttcgaggaaggcgcggtcagcattgacctgcct
gaagtgcgcgtcaaggccgacgaagccggtgctcaggtcacggccctcccccgccctgaa
atgcgcggcgtggtgcaggaatgcatgaccctggccggttggggcgcagccatctatgcc
gacgatttcgagttgccgattcccttcgccacccaggacccgccgcaccgcgaagtcagc
ggcgacaccatccccgcgcactgggcccgccgcaagacactgggacgtacccgctttcag
tcggcccccggcgcacacgcgggcatgggcctggacctttacacccaggccaccagccct
atgcggcgctacttggacttggtggtgcaccagcagttacgcgcgcatctcagcggcgct
gaacccatgagtgggcgcgaggtggccgcccatatcgccgaagccagcatcggaagcgcc
ggaacccgcaccgccgagcgcctcagccgccgccaccataccctgcgctgtatcgccgcg
cagccggaacgggtctgggaagcggtggtggtagagcgcaaagggccacaggccacactg
ctcattccggacctggccctggacctgccgatgaccacgcccagccagccggggcaagtg
ctgtcagtgactctgacggtgcaaagcttgccggacctgcgtgtccgggccagcgaaagc
tga
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