Deinococcus radiophilus: LMT64_10960
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Entry
LMT64_10960 CDS
T07688
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
drd
Deinococcus radiophilus
Pathway
drd00630
Glyoxylate and dicarboxylate metabolism
drd00680
Methane metabolism
drd01100
Metabolic pathways
drd01120
Microbial metabolism in diverse environments
drd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LMT64_10960 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
LMT64_10960 (fdhF)
Enzymes [BR:
drd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
LMT64_10960 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
NADH-G_4Fe-4S_3
Fer4_6
Fer4_7
Fer4_10
Fer4_8
Fer4_21
Fer4_9
Fer4_2
TPP_enzyme_M
Fer4_15
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
UFA51592
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All DBs
Position
pRadio1:18721..21810
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AA seq
1029 aa
AA seq
DB search
MTHAGDSSPTNNIGPKEPTVQLLFPPGPLHPKSGEWTEVQIDGVAHPAQLGEPLLDVINR
SGTELAQVCYHPQLGAIQSCDTCTVEVDGHLIRACGTKVQAGQVVRTQTEAARAAQRDAY
DRLIANHVLYCTVCDNNNGNCVVHNTLSTLRLQHQHRPYQPKGVPKDFSNPFYRYDPDQC
ILCGRCVEACQNVQVNETLSIDWEAEQPVVLWDGGAPIGDSSCVSCGHCVTVCPCNALME
TSMLGEAGLMTDLPLPVFNAAVEAVKTVEPSSGLEAILQISDIESQAREGYIQKTKTVCT
YCGVGCSFDIWTKGRHILKVEPQYGAANGISTCVKGKFGWDYVNSEDRLTSPLIREGNHF
REVGWDEALDYVARRMTDIRAQYGANALSFIASSKCTNEEAFLVQKMARQVIGTNNVDNC
SRYCQSPATVGLVRTVGYGGDSGTIKDLEQADLIIGIGTNTAESHPVLATRLKRAQKLGR
QKIIMVDLREHEMARRADLFLQPKPASDFIWLSAVSRYILDNGLAAEEFLAEHTIGLDEY
RASLEGYTLEYAAEATGWSVETLRDLAEMIAAHERVCIMWAMGVTQQCGGSETSTAISNL
LLVTGNYARPGTGAYPLRGHNNVQGTSDMGAMPDQVSGYQKVADPEVRARFEAEWGTPIS
PERGLDNSQMVDAAIDGRLKAMWLTGEEMSLTDADVNHLIKGYEALELFVVQDLYFTNTA
RYADVILPATPSLEKEGTFTSTERRIQRLYAAMDPLPGTMPDWQIYQEVARRMGFEWNYS
YPGDIMDEVARLSPMFAGVSYSRLQGYDTLCWPVAADGTDTPLLYTEGFNFADGKARLYP
AEYVGRSDAPAAEYDLHLNSGRMLEHFHEGNMTFRVPGITAKTPDAFVEISPELAAERGV
DTGDWVRVVSKNGALRLRALVTERVSGGELYIPMNSRDLEGSVNLLTGQNRDTVTNTPAY
KDTAVRLEVLDSRGANPLPRHNFRYGHPTPQRGVEVERKWARPDYSFPDGSYHTPTGMDD
HTQALGSDD
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgactcacgctggtgattcaagtccaaccaacaacattggccccaaggagccgacggtg
cagctgctgtttccgcctggcccgctgcatcccaagagcggcgagtggacggaagttcag
attgatggcgtcgcccaccccgcccagctgggtgaaccactgctggacgtgatcaaccgc
tccggcaccgagctggcccaggtctgctatcacccgcagctgggggccattcagtcctgt
gatacctgcacagtcgaggtggacggtcatctcatccgcgcctgcggcaccaaagtgcag
gctgggcaggtggtccgtacccagaccgaagcggcccgcgctgcgcagcgcgacgcctat
gaccgcctgattgccaaccatgtcctgtactgcaccgtctgtgacaacaacaacggcaac
tgcgtggttcacaacacgctcagcacgctgcggctgcagcaccaacaccgtccttaccag
cccaaaggcgtcccgaaagacttttccaatcctttttaccgctacgaccccgatcagtgc
atcttgtgcgggcgctgcgtggaggcctgtcagaacgtacaggtcaatgaaacgctcagc
atcgactgggaagccgagcagcccgtggtgctgtgggacggtggcgctcccatcggtgac
agttcatgcgtgagctgtggtcactgcgtgacggtctgtccctgcaacgccctgatggaa
acctccatgctgggcgaagcgggcctgatgaccgatctcccactgccggtgttcaacgct
gcagtagaagccgtgaagacagtagaacccagcagcggtctggaagccatcttgcagatt
tcggacattgagtcgcaggcccgcgaggggtacatccaaaagaccaagacggtctgcacc
tactgcggggtgggctgctcctttgacatctggaccaagggccgccacatcctgaaagtg
gagccacagtacggagccgccaacggcatttccacctgcgtgaagggcaagttcggctgg
gactacgtgaacagcgaagaccgcctcacctctccgctgatccgcgagggcaaccacttc
cgcgaagtgggctgggacgaggcgctggactacgtggcccgccgcatgaccgacatccgg
gcgcagtacggggccaacgccctgtcgtttatcgcctctagcaagtgcaccaacgaagaa
gcctttttggtgcagaagatggcccggcaggtgatcgggaccaacaatgtggacaactgc
tcgcgttactgccagagccccgccacggtgggcctggtgcggacggtgggctacggcggc
gactccggcaccatcaaggatttggagcaggccgatctgatcatcggcatcgggaccaac
accgccgagagccatccggtgctggccacccggctcaagcgggcacagaagctgggccgc
cagaagatcatcatggtggatctccgcgagcacgagatggcccgccgtgctgatttgttc
ctccagcccaaacccgccagtgactttatctggctctcggcggtgagccgctacattctg
gacaacggtctggccgccgaggaattcctcgctgagcacaccataggcctggacgaatac
cgcgcctcgctggaaggctacaccctggagtacgctgccgaagccaccggctggagcgta
gagaccttgcgtgacctggccgaaatgatcgccgcgcacgagcgcgtctgcatcatgtgg
gcgatgggtgtgacgcagcagtgcggtggaagtgagacgagcacggccatctccaacctg
ctgctggtcacgggcaactacgctcgccctggcactggcgcttaccccctgcgcggtcac
aacaatgtgcagggcacctccgacatgggggccatgcccgatcaggtgagcggctaccag
aaagtggccgaccccgaagtgcgtgcccgctttgaagccgaatggggcacccccatcagc
cctgagcgcggcctggacaactcgcagatggtggacgccgccattgatggtcgcctcaag
gccatgtggctgaccggcgaggaaatgagcctgaccgatgccgacgtgaaccacctgatc
aaaggttacgaggcgctggagctgtttgtcgtgcaggacctgtactttaccaacacggcc
cgctacgccgacgtgattctgcccgccacgcccagcctggaaaaagaaggcaccttcact
tccaccgagcggcgtattcagcggctgtacgcagcgatggacccgctgcccggcaccatg
cccgactggcagatctatcaggaagtggcccgccggatgggcttcgagtggaactacagc
taccccggcgacatcatggacgaggtggcccggctcagcccgatgtttgctggcgttagc
tacagccgcttgcagggctatgacaccctgtgctggccggtagccgccgacggcaccgat
acgccgctgctgtacaccgagggctttaactttgccgacggcaaggcgcggctgtacccc
gccgaatatgtggggcgcagcgacgctcccgccgctgagtatgacctccacctgaactct
gggcggatgctggagcatttccacgagggcaatatgaccttccgggtacccggcatcacc
gccaagaccccggacgctttcgtggaaatcagccccgagctggctgccgagcgtggcgtg
gacaccggagactgggtgcgcgtagtcagcaagaacggcgcgttgcgtctgcgggctctg
gtcaccgaacgggtaagtggcggcgagctgtacatccccatgaactcgcgtgatctggaa
ggcagcgtgaacctgttgaccggccagaaccgcgacacggtgaccaacacacctgcctat
aaggacacggcggtccgcctggaagtgctggacagccgcggtgccaaccccttgccccgc
cacaatttccgctacggtcaccccactcctcagcgtggcgtggaagtggagcgcaagtgg
gcacgtcccgactacagcttccctgacggcagttatcacacgccgactgggatggacgac
catacccaggcgctgggcagcgacgactaa
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