Deinococcus radiophilus: LMT64_11980
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Entry
LMT64_11980 CDS
T07688
Name
(GenBank) uracil-DNA glycosylase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_11980
Enzymes [BR:
drd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LMT64_11980
DNA repair and recombination proteins [BR:
drd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LMT64_11980
Prokaryotic type
LMT64_11980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UFA51525
LinkDB
All DBs
Position
pRadio1:233404..235686
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AA seq
760 aa
AA seq
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MQPVSAVWFKKDLRVTDHAALVGAAESGGPVLPLYIYEPEQLHHEEFGGHHLDYLNECLR
DLAQRLAQLGSPLVIRRGEAVAVLEALSREISIGSLWAHQETGNGVSFARDLRVHAWARA
RGIPFYEPPQQGVFRRMVDRDRWADAWEARMSQSPVPPPVLRPPAKALRSEGCLDHRALK
VERNLKVIPQGGETAARSVLDSFLAQRGRDYMWAMSSPLTAEDACSRLSAPLAFGTVSLR
TVLLETRQALARSLGDQGADPRWVRSLRSFESRLHWHDHFIQRLESEPRLEFENLNRAYD
GLREPHWNEEYFDRWCQGQTGYPLIDACMRMLQATGWLNFRMRAMLVSFASHHLWLHWRR
PGLFLARQWLDNEPGIHWSQMQMQSGTVGINRSRVYSPTRQAREQDPQGDFIRRWVPELS
AVPAPHIWRPWELPPLTAQSLGVRLGRDYPYPVVAEHGPARAAHDRLQAVRQSLQFRAEA
QRIYTLHGSRKKAVIRAERERRGLPPKSERSARAPIQPRRHPMADQPNLFDTQDSSPPAL
TLPGDWNNVLADTLRRPALHRLAEFVEEERRQHTVYPPPEDVFTALRLTSYRDTKVLILG
QDPYHGPGQAHGLAFSVQRGVRIPPSLRNIYRELQEDQGIKPPPHGNLEAWAERGVLLLN
AVLTVRAGEANSHAGQGWEDLTDAVISALNTKGEGVVFVLWGAYARKKKRLITAPQHVVI
ESGHPSPLSVRHFAGTRPFSAVNRALAEMGMAEINWRLPE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcagccagtgtccgccgtctggttcaagaaagacttgcgcgtcacggaccatgcggcc
ctggtgggcgctgccgagagcggtgggccagtgttgccgctctacatctacgaaccagag
cagttacatcacgaggaattcggtgggcatcatctggattacctgaacgaatgcctgcgc
gacctggctcagcggctcgcgcagcttggctcaccgttggtgattcggcgcggtgaagcg
gtcgccgtccttgaagccctgagccgcgagatctctatcggttcgctgtgggcacatcag
gagacgggcaacggggtcagctttgcgcgggatctgcgggttcatgcctgggcgcgggcg
cggggcattcccttctacgagccgccgcagcagggtgtatttcgccgcatggtggaccgt
gaccgctgggccgatgcctgggaagcgcggatgtcccagtcgcctgtgccgccgcctgtg
ctccgcccgcctgccaaggcgctgcgcagcgaaggctgtctggatcaccgtgcgctaaaa
gttgagcgcaacctcaaggtgattccccagggcggcgaaacggcagcgcggagtgtgctg
gattcgtttttggcccagcgggggcgcgactacatgtgggccatgagtagcccactgacc
gccgaagacgcctgttcgcggctcagcgcaccgctggcgttcgggacggtatctctgcgg
acagtactgttagaaacccgccaggcgctggcccgctcactgggggaccaaggcgctgat
ccccgctgggtgcgctccctgcgctcgttcgagagtcggctgcactggcacgatcacttt
attcagcggctggaatccgagccacgcctggaattcgagaatctgaaccgggcctacgat
ggcctgcgtgaaccccactggaatgaggagtattttgaccgctggtgtcagggacagacc
ggctatccgctgattgacgcctgtatgcggatgctgcaggccaccggctggcttaatttc
cggatgcgggctatgttggtcagcttcgcgtcacatcacctgtggctgcactggcggcgg
ccaggactgttcttggcgcggcagtggctggacaacgagccaggcattcactggtcgcaa
atgcagatgcagtctgggacggtgggcatcaaccgcagccgggtctattctccgacgcgc
caggcccgtgagcaggacccgcagggtgactttattcgccgctgggtgccggaactgagt
gcggtcccggcaccgcacatctggcggccctgggagctgccgccgctgacggcccagagc
ctgggggtgcggctaggccgcgattatccttatccggtggtcgctgaacatgggccggcc
cgcgctgcccacgacaggctgcaggcggtgcggcagtcccttcagttccgcgccgaagct
cagcgcatctacaccctacatggtagccgcaaaaaagctgtgatccgcgctgaacgtgag
cggcgcggcctgccgcccaagtcggagcgttcagcgcgcgcccccatccaaccgaggaga
caccctatggctgaccaacccaacctgtttgatactcaagactccagtcccccagctctg
accttgccgggggactggaacaacgtcctggccgacaccctccgccgtcccgcgctgcac
cgcctcgccgaattcgtggaggaggagcgccgtcagcacaccgtctatccaccgcccgag
gacgtctttacggcactgcggctcacgtcttaccgcgataccaaagtgctgattctaggt
caggacccttaccacggcccaggtcaggcacacggactggccttcagtgtgcagcgcggt
gtccggattccgcccagcctgcggaatatttaccgcgaactgcaggaggatcaggggatc
aagccgcccccgcacggcaacctggaagcctgggccgagcgcggtgtgctgctcctgaat
gcggtcctgacggtccgtgccggtgaggccaacagccacgcaggacagggctgggaagac
cttacggacgcagtgatctccgcgttgaataccaaaggggagggggtggtctttgtcctc
tggggagcctatgctcgcaagaagaaacgcctgatcaccgcgccgcagcacgttgttata
gaaagtggacaccccagtcccctcagcgtgcggcattttgctggaacgcggccttttagc
gcggtgaaccgggcattggccgaaatgggaatggccgagatcaattggaggctgccagag
tga
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