Deinococcus radiophilus: LMT64_12790
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Entry
LMT64_12790 CDS
T07688
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
drd
Deinococcus radiophilus
Pathway
drd00730
Thiamine metabolism
drd01100
Metabolic pathways
drd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LMT64_12790 (thiC)
Enzymes [BR:
drd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LMT64_12790 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UFA51728
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All DBs
Position
pRadio2:123953..125716
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AA seq
587 aa
AA seq
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MSATLDKTKFSKKDAGRELTGLTLGPFPGSDKAYLEHPQRPDIRVPVRVIRQSPTQEHLG
SLTRSVPNPDVYVYDASGPYSDAAAQIDLERGLSPVRTWVKPRGRTQMQAARAGEITPEM
EYIALREAMRQPEDGGLTHQHPGFGHGFAMPREITPEYVRAEVARGRAVIPANVMHPELE
PMIIGRGFRVKINANIGNSVVRASIVDEVEKLIWATRWGADTVMDLSTGPEIHQTREWIV
RNSPVPIGTVPIYQALEKVGGVAEGLTWEIYRDTLIEQAEQGVDYFTVHAGVRLPWLPLT
ANRRTGIVSRGGSILARWCLAHHQENFLYTHFREICEIMREYDVTFSLGDGLRPGSIQDA
NDQAQFAELQTLGELTRIAWEEGVQTMIEGPGHVPLHLIAENMTRELEACLEAPFYTLGP
LTTDIAPGYDHITSAIGAATIGWHGTAMLCYVTPKEHLGLPDREDVREGVVTYKLAAHAA
DLAKGFPGAQYRDNAISKARFEFRWEDQFNLSLDPERARAFHDQTLPAEAAKTAHFCSMC
GPQFCSMKLSQDLAGDLQAYMAEGLAEKAQEFRSQGGEIYAAARDDG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacacttgacaagaccaaattcagtaaaaaggatgccgggcgtgaactgacc
ggcctgaccctggggccattcccgggcagtgataaggcctacttggagcaccctcagcga
ccggacattcgcgtgccggttcgggtgatccgtcagagccccacccaggaacacctgggc
agcttgacccgctcggtccccaatcctgatgtgtatgtgtatgacgccagcgggccgtat
agcgacgctgccgcacagattgacctggagcgcggcttatcgccggtccggacttgggtc
aagccgcgtggccgcacccagatgcaggccgcccgcgccggagagatcacgcccgagatg
gaatacatcgccctgcgtgaagcgatgcgccagcctgaggacggtggcctgacccatcag
catcccggcttcgggcacggctttgccatgccgcgtgagattaccccggagtatgtccgc
gccgaggtggcgcgtggccgggcggtgattcccgccaacgtgatgcacccggagctggaa
ccgatgatcatcgggcgtgggttccgggtcaagatcaatgccaacattggcaattcggtg
gtccgcgcttctatcgtggatgaggtcgaaaagctgatctgggccacccgctggggcgcg
gatacggtgatggacctctcgaccggcccggagattcaccagacgcgggaatggatcgtc
cgcaacagcccggtgccgatcggtacggtcccgatctatcaggcactggaaaaggtgggt
ggcgtggccgagggcctcacctgggagatctaccgggacaccctgatcgagcaagcggag
caaggcgtggactacttcacggtgcacgccggggtgcgtctgccctggctgccgctgacc
gcgaaccgccgcaccgggatcgtgtcgcgggggggatcgatcctggcccgctggtgcctg
gcgcaccatcaggagaactttctgtatacgcacttccgcgagatctgcgagatcatgcgc
gaatacgacgtgaccttcagcctcggtgacgggctgcgtcccggttccattcaggacgcc
aatgaccaggcccagttcgcggagctgcagaccctgggcgagctgacccgcattgcctgg
gaggagggcgtgcagaccatgatcgaagggccggggcacgtgccgctgcaccttatcgcg
gaaaacatgacccgcgagctggaagcctgcctggaagcgcccttttacacgctggggcca
ctgaccaccgatattgcgccgggctacgaccacatcaccagtgccattggtgcggcgacc
atcggctggcacggaacggcgatgttgtgttacgtgacgcccaaggaacacctcggcctg
cccgaccgcgaggacgtgcgcgaaggggtcgtgacctacaagctggccgcccacgccgcc
gacctcgccaaaggttttcctggggcgcagtaccgcgacaacgccatcagcaaggcccgc
ttcgagttcaggtgggaagaccagttcaatctcagcctggaccccgagcgcgcccgcgcc
tttcacgaccagacgctacctgccgaggccgccaagaccgcgcacttttgctccatgtgc
ggaccgcagttctgttccatgaagctgagtcaggacctggcgggtgacctgcaggcctac
atggccgagggcctggccgagaaggcgcaggagttccgcagccagggcggagaaatctac
gcggcggcgcgggacgatggataa
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