Deinococcus radiophilus: LMT64_13950
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Entry
LMT64_13950 CDS
T07688
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
drd
Deinococcus radiophilus
Pathway
drd03420
Nucleotide excision repair
drd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LMT64_13950
03430 Mismatch repair
LMT64_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_13950
Enzymes [BR:
drd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMT64_13950
DNA repair and recombination proteins [BR:
drd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LMT64_13950
MMR (mismatch excision repair)
Other MMR factors
LMT64_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
UvrD_C
UvrD_C_2
AAA_22
SLFN-g3_helicase
ResIII
PhoH
AlaDh_PNT_C
AAA_16
YbjQ_1
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
UFA51986
LinkDB
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Position
pRadio3:complement(91059..92606)
Genome browser
AA seq
515 aa
AA seq
DB search
MSTFQPSHYQQAIFDFVRSGTGDGVVRATAGAGKTTTLVEIAKQLPSDLDAVFLAFNTHT
ANELRARLPRHVRACTVHSLGRRSLLDRFSQLGKRDPDTRKSRLLIKESIDRLKLEFAVP
SEQWLQAEKYLQELLRFSVANLTDTKVEERVAQLAVEYNLTAPADQGLEVQCHREVRQLL
RRRLDVFQEHGLYDYEDMLYLPIVLKLDIPKYDFVFVDEAQDLSAVQLELVLKAVREGGR
RLFVGDERQAIYGFTGADADSLARIVERTGATVLPLSVTYRCPRSHVALAQQLAPEIEAA
PGAPEGKIHVIKEAWLPRWVRRGDLVICRYTAPLVSNCLALLQQQIPAVVRGMDIGRDLL
EMATQLFAGGLNGWEEQLGAYRIAEEARIRRRAANEIDAERQIAVRSDLLDSLEVLTAEV
VRQGHHRLANLTEYIADFFSDKGGAPVVFSTIHRAKGKEADRVFILYPDNMPAVYARTAA
AARGEACVQFVALTRAKKDLIFVEQQRSEMAVVQP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacgtttcagcccagtcactatcagcaggccatcttcgacttcgtgcggagcggt
accggtgacggagtggtccgcgctacagcaggcgcaggcaagaccacgaccctggtcgag
atcgccaagcaattaccgagtgatctcgatgcggtatttctggccttcaatacccacacc
gccaacgaactcagggcgcggctccccagacatgtcagggcctgcacggtccactcgctc
ggccgccggagcttactggaccggttttcacagcttgggaagcgtgatcctgacacccgg
aaatccagactcctgatcaaagaaagcatcgaccgattgaaactggaattcgccgtgccg
agcgagcaatggctacaagcagagaaatatctccaggaactgctgcgcttctcagtcgcc
aatctcactgacaccaaggttgaagagcgggtcgcgcagctggccgtcgaatacaatctg
actgcccctgcagatcagggactggaggtgcagtgccaccgtgaggtccgccagctgctg
cgccggcgactcgacgtctttcaggaacacggcctctacgactacgaggacatgctgtac
ctgccgatcgtcctcaagctggatattcccaagtatgactttgtgttcgtggacgaggcg
caggacctgagtgccgtgcagctggaactggtgctgaaagccgtccgagaaggagggcgt
aggctgttcgtgggtgacgagcgtcaggccatttacggctttaccggagcagacgccgac
tcactggcacgcatcgttgagcggaccggagccacggtcctgcccctttccgtcacgtac
cgctgcccccgctcgcacgtcgcgctcgcccagcaattggcaccggaaatcgaagcggcc
cctggagccccagaagggaaaattcatgtcattaaagaagcctggcttccgcgttgggtg
cggcgcggcgacctggtcatctgccggtataccgctccactggtcagcaactgtctggcc
ctcttgcagcagcaaatccccgccgtggtccgcggcatggacattggccgggacctgctg
gagatggccacgcagctgttcgccggcggactaaacggatgggaggaacagctcggtgcc
taccggatcgccgaagaagcccgcatccgccgccgcgccgcaaacgaaatcgacgccgaa
cggcagatcgctgtccggtccgatctgctggattcacttgaggtcctcaccgccgaggtt
gtccgccaaggccaccacagactggcgaatttgaccgaatacatcgcagacttcttcagt
gataaaggcggcgctccagtcgtgttcagcaccattcacagggccaaaggcaaggaggcg
gaccgggtcttcattctctacccagacaacatgccggccgtctatgcccgaacagcagcc
gctgcgcgcggagaagcctgcgtccagttcgtggcactgacgcgcgccaaaaaggatctt
atctttgtcgagcagcagaggtcggaaatggcggtcgttcagccatga
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