Diaphorobacter ruginosibacter: H9K76_12180
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Entry
H9K76_12180 CDS
T06813
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
drg
Diaphorobacter ruginosibacter
Pathway
drg00541
Biosynthesis of various nucleotide sugars
drg01100
Metabolic pathways
drg01250
Biosynthesis of nucleotide sugars
Module
drg_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
drg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H9K76_12180 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
drg01005
]
H9K76_12180 (kdsB)
Enzymes [BR:
drg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
H9K76_12180 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
drg01005
]
Lipid A
H9K76_12180 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
QNN55429
UniProt:
A0A7G9RIK4
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All DBs
Position
2700960..2701763
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AA seq
267 aa
AA seq
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MNTARTTQAPFTVLIPARMASSRLPDKPLADIGGMPMVVRVAQRTMQSGASRSVVAADDQ
RIVDACALHGVHAILTRADHPSGSDRLAEACEQLGLDGSDIVVNVQGDEPLIDPRLIDSV
ATILGERTDASMGTAAHAIDSYEDYVNANVVKVVLDAKGLAHYFSRSPIPFARDAAPGTA
WWKDTDRLPAAARGMQPLRHIGIYSYRAGFLRQFPQLPAAPTEAMEALEQLRALWHGHRI
AVHVTEHAPGPGVDTPADLERVRSLFR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcccgcaccacacaggcaccgttcacggtgctgatccccgcgcgcatggcc
tcttcgcgcctgcccgacaagccgctcgccgacatcggcggtatgcccatggtggtgcgg
gtggcgcagcgcacgatgcaaagcggcgcaagccggtccgtcgtggcggcggatgaccag
cgcatcgtcgatgcctgcgcactccatggcgtgcacgccatccttacgcgggccgatcac
ccgagcggcagcgaccggctggccgaggcctgcgagcaactcggcctcgacggcagcgac
atcgtggtcaacgtacagggcgacgagccgctgatcgatccacggctgatcgattccgtg
gccacgatcctcggcgagcgcaccgatgccagcatgggcacggccgcgcacgcgatcgac
tcctacgaagactatgtgaatgccaatgtggtgaaggtcgtgctcgatgccaagggcctt
gcgcactacttcagccgctcgcccattccctttgcccgtgatgccgcgcccggcaccgcc
tggtggaaagacacggaccgtcttccggcggcagcccggggcatgcagccgctgcgccac
atcggcatctacagctaccgcgccggctttctgcgccagttcccccagctgcctgcggca
ccgaccgaggccatggaggcgcttgagcagctgcgtgcgctttggcacggccaccgcatc
gccgtccatgtgaccgaacatgcgcccggccccggtgtggacaccccggccgacctggag
cgcgttcgctctctttttcgctga
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