Diaphorobacter ruginosibacter: H9K76_15385
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Entry
H9K76_15385 CDS
T06813
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
drg
Diaphorobacter ruginosibacter
Pathway
drg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9K76_15385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drg03019
]
H9K76_15385
Enzymes [BR:
drg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9K76_15385
Messenger RNA biogenesis [BR:
drg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9K76_15385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QNN55968
UniProt:
A0A7G9RK43
LinkDB
All DBs
Position
3384593..3386476
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AA seq
627 aa
AA seq
DB search
MTFDELELDPAILQAVTEQGYQNPTPIQEQAIPAVLTGKDLLAGAQTGTGKTAAFTLPML
TRLAKGTAPSNKFGGKGIRALVLTPTRELAAQVEESVRAYGKYLNLKSCVVFGGVGMNPQ
IERIKRGVDVLVATPGRLLDLEQQGFLDLSTVEILVLDEADRMLDMGFIHDVKKVLKLVP
REKQSLLFSATFSDDIRELANGLLREPLSIQVTPRNTTVQRISQVIHPVGRARKKEVLLH
IIRENDWSQVLVFTRTKFGANNVADFLTKNGVTAMALHGNKSQSARTQALGGFKSGEIRA
LVATDIAARGIDIDDLPHVVNYEIPNVPEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMM
EIERFTKQEIPVQVLEGFGPAPDEVAEPIAMGRQTIWGGAGKPPGRDVMQAAAKAARQEM
MERIRSNKASQGDSRGKRGGQRGPRNAEQGDEAGAAQADGEQQAPRARQPRNERSGERRE
RSHDRGDRQNGNQASGSGQREDGNGGRRGPRRGPGQSLQNNAGRRRQGGENAGGNGNGNG
NGNGGRRHDDSQPRGENAHLGTQFGHLGNGSRHGRGGPAQPDPMRTSVDIMGDRNRRGGG
GFRGGFGGGNGGGGNNRGGGRFGGNGR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgacgaactagagctggatccggccattctgcaggccgtgaccgaacagggc
tatcagaacccgacccccattcaagagcaagcgattccggcggtcctcaccggcaaggat
ctgctggcaggagcgcagaccggcaccggcaagacggccgccttcacgctgccgatgctc
acccgtctcgccaagggtaccgcaccttcgaacaagtttggcggaaagggcattcgcgcc
ctcgtgctcacccccacccgcgaactggctgcgcaggtcgaggaatccgtgcgcgcctat
ggcaagtacctgaacctcaaatcctgcgtcgtattcggcggcgtgggcatgaacccacag
atcgagcgcatcaagcgcggtgtggatgtgctggtggcgacaccgggccgtctgctcgat
ctggagcagcagggcttcctcgacctgtccaccgtggaaatcctggtgctggacgaagcc
gaccgcatgctggacatgggcttcatccatgatgtgaagaaggttctcaagctggtcccc
cgggaaaagcagagcctgctgttctcggccaccttcagcgacgatatccgcgaactggcc
aacggcctgctgcgcgagcccctgtcgatccaggtcacgccgcgcaacaccacggtgcag
cgcatcagccaggtgatccacccggttggccgcgcccgcaagaaggaagtgctgctgcac
atcatccgcgagaacgactggagccaggtgctggtgttcacgcgcaccaagttcggcgcc
aacaacgtggccgacttcctcaccaagaacggcgtcacggccatggcgctgcacggcaac
aagagccagagcgcccgcacgcaggcgctcggcggcttcaagtcgggcgagatccgcgcg
ctggtcgccaccgacatcgctgcccgcggcatcgacatcgacgacctgccgcacgtcgtg
aactacgaaatcccgaacgtccccgaggactacgtgcaccgcatcggccgtaccggccgc
gccggccgcgaaggccacgccgtgagcctggtctgcatggacgaagaaggcttcatgatg
gagatcgaacgcttcaccaagcaggaaatccccgtgcaggtgctcgagggcttcggcccc
gcccccgacgaagtggcagaacccatcgccatgggtcgccagaccatctggggcggtgcg
ggcaagccgccagggcgcgacgtgatgcaggccgcagccaaggcagcccgtcaggaaatg
atggagcgcatccgctccaacaaggcttcccagggtgactcgcgcggcaagcgcggtggc
cagcgcggcccccgcaatgcagagcaaggcgatgaggcgggagcggctcaggcagatggc
gagcagcaggctccccgcgcacgccagccccgcaatgaacgcagcggcgagcgccgcgaa
cgcagccacgaccgcggtgatcgccagaacggcaaccaggcatcgggcagcggccagcgc
gaggacggcaacggaggtcgccgcggcccacgccgtggccccggccagtcgctgcagaac
aacgccggccgtcgccgccagggcggcgagaatgccggcggcaatggcaatggcaatggc
aatggcaatggtggccgtcgtcacgacgacagccagccacggggcgagaatgcccacctg
ggcacccagttcggccatttgggcaatggctcgcgccatggccgtggcggcccggcccag
cccgaccccatgcgcaccagcgtcgacatcatgggcgaccgcaatcgccgtggcggcggc
ggattccgtggtggattcggtggcggcaacggtggtggcggcaacaaccggggcggcgga
cgcttcggcggcaatggccgctga
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