Diaphorobacter ruginosibacter: H9K76_16875
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Entry
H9K76_16875 CDS
T06813
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
drg
Diaphorobacter ruginosibacter
Pathway
drg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9K76_16875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drg03019
]
H9K76_16875
Enzymes [BR:
drg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9K76_16875
Messenger RNA biogenesis [BR:
drg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9K76_16875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QNN56218
UniProt:
A0A7G9RKU3
LinkDB
All DBs
Position
complement(3714513..3715970)
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AA seq
485 aa
AA seq
DB search
MTQAYSSLALAEPLKRAVADMGYEFMTPIQEQAIPVVLAGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHETSSVSPARHPVRALVLLPTRELADQVAQQVALYAKYTKLRSTVVFGGMDMK
PQTLELKKGVEVLVATPGRLLDHIEAKNVVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKSRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQRFFSSTDDDKRRAI
KQVLKDRGINQAFIFVNSKLGCARLTRALERDGLKAAALHGDKSQDERLKALEAFKSGEV
HLLCCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGIAVTLVTSHDARQ
VAEIEKLIKKKINVEAIELDDDRPRGRFNDGRRAWRSDDGEEQRQERSDRQPGYSRGHRS
EGHRGGYRQAPQDPFFDKPYEPGAPSQAPASWEASGKAQPVRGSTNIRSKRKIPALFKPT
PVSAE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagcctattcttcccttgcgctggctgaaccgctcaagcgcgccgtagccgac
atgggctacgagttcatgacgccgattcaggagcaggccattccggtcgtgctcgcgggc
caggacgtgatgggtgctgcccagaccggaaccggcaagacggcggccttttcgctgccg
ctgctccagcgcctgctcaagcacgagaccagctccgtatcgccggcgcgccatcccgtg
cgcgccctggtgctgctgcccacgcgcgagctggcggatcaggtcgcccagcaggttgcg
ctgtacgccaagtacaccaagctgcgcagcaccgtggtgttcggcggcatggacatgaag
ccccagaccctcgagctcaagaagggcgtcgaggtgctggtggcaacgcctggccgcctg
ctggaccacattgaggccaagaatgtggtgctcaaccaggtcgagtacgtggtgctggac
gaggccgaccgcatgctggacatcggcttcctgcccgacctgcagcgcatcctctcctac
ctgcccaagagccgtaccacgctgctgttctccgcgacgttctcgcccgagatcaagcgc
cttgccggcagctacctgcagaacccgatcaccatcgaggtcgcgcgtccgaacgagacg
gcctccacggtggagcagcgtttcttctcgtccaccgatgacgacaagcgccgagcgatc
aagcaggtgctcaaggaccgcggcatcaaccaagccttcatcttcgtgaacagcaagctc
ggttgcgcccgcttgacgcgcgcgctcgagcgcgacggcctcaaggcggcggcgctgcac
ggcgacaagagccaggacgagcgcctgaaggcgcttgaggccttcaagagcggtgaagtc
catctgctgtgctgcaccgacgtggctgcacggggcctggacatcaaggatgtgcccgcc
gtgttcaactacgacgtgccgttcaatgccgaggactacgtgcaccgcattggccgcacg
ggccgcgctggcgcctcgggtattgccgtgacactggtgacttcgcacgatgccaggcag
gttgccgagatcgagaagctgatcaagaagaagatcaacgtcgaggcgatcgagctggac
gacgatcgtcctcgcggccgtttcaacgatggccgccgtgcatggcgcagcgacgatgga
gaagagcagcgccaggaacgttccgaccgccagcccgggtactcccgaggccaccgcagc
gaaggccatcgcggcggctaccgccaggcgccccaggatccgttcttcgacaagccctac
gaacccggagcaccttcgcaggccccggcaagctgggaggccagcggcaaggcgcaaccg
gttcgcggctcgacgaacatccgctccaagcgcaagattcccgcgctgttcaagccgacg
cccgtgtcggccgagtga
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