Devosia rhizoryzae: JI748_01040
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Entry
JI748_01040 CDS
T09886
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
drh
Devosia rhizoryzae
Pathway
drh02020
Two-component system
drh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JI748_01040
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JI748_01040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
drh02022
]
JI748_01040
02035 Bacterial motility proteins [BR:
drh02035
]
JI748_01040
Two-component system [BR:
drh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
JI748_01040
Bacterial motility proteins [BR:
drh02035
]
Flagellar system
Flagellar assembly proteins
Others
JI748_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Response_reg
AAA_3
AAA_19
AAA
MCM
AAA_2
AAA_22
Myosin_head
HTH_50
AAA_7
AAA_18
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QQR39635
LinkDB
All DBs
Position
complement(218570..219937)
Genome browser
AA seq
455 aa
AA seq
DB search
MRLLIIGALEGQLSTATKMAMDGGAKVAHAPSIEIALAALRAGKGADLLLVDVMMNISGL
IAGLEAERIAVPVVACGVETNAAAAVNAIRAGAKEYIPLPPDAELIAAVIAAVARESSEF
LYRDPAMERVVKMAEQIAGSEASILITGESGTGKEVVAKYVHARSKRASKAFISVNCAAI
PEALLESELFGHEKGAFTGAVARRIGKFEEASGGTLLLDEISEMDVRLQAKLLRAIQERV
IDRVGGTKPVPVDIRILATSNRNLSEAVREGSFREDLLFRLNVVNLKLPALRERPGDIIA
LSEHFVAKYAKANGIPPRALSAEARNALVKAPWPGNVRELENTLHRAVLLSSGDTIGTEA
IVLPDGMGLAEAARATSPAMMAAQTAEAMNRALVGRTVADVERDLILDTLDHTFGNRTHA
ATILGISIRTLRNKLNQYADEGTHVPEPGERRAVA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgctcatcattggagccctcgaaggccagctctccaccgcaaccaagatggcc
atggacggcggcgccaaggtcgcccatgccccctcgatcgaaattgccctcgccgccctc
cgcgccggcaagggggccgacctgctgctcgtcgacgtgatgatgaacatctcgggcctc
attgccgggctagaagccgagcgcatcgccgtgccggtcgtcgcctgcggcgtcgagacc
aatgccgccgccgccgtcaacgccatccgcgccggcgccaaggaatatatcccgctgccg
cctgacgccgagctgatcgccgccgtcatcgccgccgtcgcccgcgaaagctcggaattc
ctttatcgcgacccggccatggagcgcgtcgtcaagatggccgagcagatcgctggctcg
gaagcctcgatcctgatcaccggcgaatcgggcaccggcaaggaagtcgtcgccaaatac
gttcacgcccgctccaagcgcgcgtcgaaagcctttatctccgtcaactgcgccgcgatc
ccggaagcactgctcgaatccgagcttttcggccacgaaaagggtgcctttaccggcgcc
gtcgcgcgccgcatcggcaagttcgaggaagcctctggcggcaccctcctgctcgacgaa
atttccgaaatggacgtgcgcctccaggccaagctcctgcgcgccatccaggaacgcgtc
atcgaccgcgttggcggcaccaagcccgtgcccgtcgacatccgcatcctcgccacttcc
aaccgcaatctcagcgaggccgtgcgtgaaggcagcttccgcgaagacctcctgttccgc
ctcaacgtcgtaaacctgaaactcccggctttacgcgagcgccccggcgacatcatcgcc
ctctccgagcatttcgtcgccaaatacgccaaggccaacggaatcccgccgcgcgcactc
tccgcagaagcgcgcaatgccctggtgaaagccccctggccgggcaatgtgcgcgaactg
gaaaacaccctccaccgcgccgtgctgctctcctccggcgacaccatcggcaccgaagcc
atcgtcctgcccgacggcatgggcctcgccgaagccgcccgtgcgacctcgcccgccatg
atggccgcgcaaaccgccgaggccatgaaccgcgccctcgtcggccgcaccgtcgccgat
gtcgagcgcgacctcatcctcgacaccctcgaccacaccttcggcaaccgcacccatgcc
gcgaccatcctgggcatctccatccgcaccctgcgcaacaaactcaaccaatatgccgac
gaaggcacccatgtgcccgaacccggcgaacgccgcgcggtggcttga
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