Devosia rhizoryzae: JI748_01770
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Entry
JI748_01770 CDS
T09886
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
drh
Devosia rhizoryzae
Pathway
drh00020
Citrate cycle (TCA cycle)
drh00640
Propanoate metabolism
drh00660
C5-Branched dibasic acid metabolism
drh00720
Other carbon fixation pathways
drh01100
Metabolic pathways
drh01110
Biosynthesis of secondary metabolites
drh01120
Microbial metabolism in diverse environments
drh01200
Carbon metabolism
Module
drh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
drh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JI748_01770 (sucD)
00640 Propanoate metabolism
JI748_01770 (sucD)
00660 C5-Branched dibasic acid metabolism
JI748_01770 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
JI748_01770 (sucD)
Enzymes [BR:
drh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JI748_01770 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQR39771
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All DBs
Position
364270..365178
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AA seq
302 aa
AA seq
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MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGVNPKKAGETWTSSLDVTAQLP
VFATVAEGKERTGANASVIYVPPPGAAAAIEEAIDAEIPLIICITEGVPVMDMVRVKAKL
EKSKSRLIGPNCPGVLTPEECKIGIMPGSIFSKGSVGIVSRSGTLTYEAVFQTTNEGLGQ
TTAVGIGGDPVKGTEFIDMLEMFLADEATKSIIMIGEIGGSAEEDAAQFLIDEAKRGRKK
PMAGFIAGRTAPAGRTMGHAGAVISGGKGGAEEKIAAMEAAGIKVSASPARIGATLAEVL
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtctattctcgtcaacaaagacaccaaggttctcgtgcagggtctgaccggcaagacc
ggcaccttccacacggaacaggcgctcgcctattatggcacccagatggtgggcggcgtg
aaccccaagaaggccggcgaaacctggacatcctcgctcgacgtcaccgcgcagctgccg
gtcttcgcgaccgttgccgaaggcaaggagcgcaccggcgccaatgcctcggtcatctat
gtgccgcctcctggcgccgctgccgccatcgaggaagcgatcgacgcggaaatcccgctg
atcatctgcatcaccgaaggcgtgccggtcatggacatggtccgcgttaaggcaaagctc
gaaaagtccaagtcgcgccttatcgggccgaactgcccgggcgttttgacgccggaagaa
tgcaagatcggcatcatgccgggctcgatcttctcgaagggctcggtgggcattgtttcg
cgctccggcacgcttacctatgaagccgtgttccagaccaccaatgaaggcctgggccag
acgaccgccgtcggcatcggcggcgatccggtcaagggcaccgaattcatcgacatgctc
gaaatgtttttggccgacgaagcgaccaagtcgatcatcatgatcggcgagatcggtggc
tcggccgaagaggacgcagcgcagttcctgatcgacgaagccaagcgcggccgcaagaag
ccgatggctggcttcatcgccggccgcaccgcaccggccggccggaccatgggccatgct
ggcgccgtgatttcaggcggcaagggcggcgcggaagaaaagatcgcagccatggaagcg
gccgggatcaaggtctcggcatctccggcccggatcggcgcgaccttggcggaagtgctt
cggggctag
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