Devosia rhizoryzae: JI748_02000
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Entry
JI748_02000 CDS
T09886
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
drh
Devosia rhizoryzae
Pathway
drh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI748_02000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drh02000
]
JI748_02000
Transporters [BR:
drh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JI748_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QQR39816
LinkDB
All DBs
Position
complement(412201..413307)
Genome browser
AA seq
368 aa
AA seq
DB search
MTFKSALTASVSLLSVLSLSAPAFAQADLDALYEAAKAEGQLTTIALPHSWCNYGGVIEG
FKAKYPGITVNELNPDAGSADELEAVRANIGNTGPQAPDVLDIGLAFGPQAKDEGLLQAY
KVSTWDEIPDDAKDADGFWYGDYYGVLAFGINKDIVTGDNPASWADLQKDEFANSVALAG
DPRTANNAIMSVFAAGLAAGDQAGAAQAGLEFFKALNEKGNFVPVDAEAAAIAQGTTPIA
INWDYNLLAARDNMNSNPPIEVVVPSDGVVAGVYVQAISAHAPHPNAAKLWMEYLYSDKG
QLGWLEGYCHPIRFNAMSEAGTLPAELMEKLPAADNYAKAVFPTIEEQNANKATITGGWD
STVGASVQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagtccgcgctcaccgcttcggtctcgcttctgagcgtgttgagcctttct
gcccccgcattcgcccaggccgacctcgacgcgctctatgaagccgccaaggccgaaggc
cagctcaccaccatcgccctgccccactcctggtgcaactatggtggcgtgatcgagggt
ttcaaggccaagtatcccggcattaccgtcaatgaactgaaccccgatgccggttcggcc
gatgagctcgaagccgtccgcgccaatatcggcaataccggcccgcaggccccagacgtg
ctcgatatcggtctcgccttcggcccgcaggccaaggatgaaggcttgctgcaggcctac
aaggtctcgacctgggatgagatccccgacgacgccaaggatgccgacggcttctggtat
ggcgactattatggcgtcctcgccttcggcatcaataaggacatcgtgaccggcgacaac
ccggcatcgtgggcagatctgcagaaggacgagttcgccaattcggtcgccttggccggt
gacccgcgtacggccaacaacgccatcatgtccgtctttgccgctggccttgccgcgggc
gaccaggctggcgccgcacaggccggtctcgaattcttcaaggcgctgaacgaaaagggc
aacttcgtccccgtcgatgccgaagccgccgccatcgcccagggcacgaccccgattgcc
atcaactgggactacaacctcctcgccgcccgcgacaacatgaacagcaacccgccgatc
gaagtcgtcgtgccgtcggatggcgttgtcgccggcgtctacgtccaggccatttcggcg
catgcgccgcatcccaacgcggcaaaactctggatggagtacctctattccgacaaaggt
cagcttggttggctcgaaggctactgccacccgatccgcttcaacgccatgagcgaagcc
ggcaccctgcccgccgagctgatggaaaagctcccggccgccgacaactacgccaaggcc
gtgttcccgacgatcgaagagcagaacgccaacaaggcgacgatcacgggcggctgggat
tccaccgtcggcgcaagcgttcaataa
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