Devosia rhizoryzae: JI748_04075
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Entry
JI748_04075 CDS
T09886
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
drh
Devosia rhizoryzae
Pathway
drh03420
Nucleotide excision repair
drh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JI748_04075
03430 Mismatch repair
JI748_04075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drh03400
]
JI748_04075
Enzymes [BR:
drh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI748_04075
DNA repair and recombination proteins [BR:
drh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI748_04075
MMR (mismatch excision repair)
Other MMR factors
JI748_04075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QQR40197
UniProt:
A0ABX7CBQ8
LinkDB
All DBs
Position
complement(816996..819332)
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AA seq
778 aa
AA seq
DB search
MAEPAPLYRPGAGPNTSRLQQAPAMDYLAGLNPEQRDAVLATEGPVLVLAGAGTGKTRVL
TTRIAHILNQRLAWGSQILAVTFTNKAAGEMKKRIHELVPNFDGMPWMGTFHSVSARILR
QHAELVDLKPSFTILDTDDQIRLIKQLLAAENIDEKRWTARGFAGLLDTWKNRGWLPKDV
PASESSVFANGRLPNLYADYQARLKTLNAVDFGDLLLECIRLFREQPDVLAEYHKRFKYM
LVDEYQDSNTAQYLWLRLLAQGRPANEANICVVGDDDQSIYGWRGAEVDNILRFEKDFPG
AKVVKLERNYRSTANILKAASTLIAFNEGRLGKTLHTDVAEAGEPISFTQVYDSEEEART
VGEEIEQFQRLGEPLNSMAILVRASFQMREFEERFITLGLNYRVIGGPRFYERKEIRDAL
AYLRLVAQPFDDLAFERIINVPKRGLGDSTVNMLTATARHQNVPLLQSTRMLVETEDLKP
KQRSVLRALVAQFDDWSYRAESLPPYQLVEQILEESGYMDMLSADKSAESEGRKENLKEL
SRSMEEFETLGGFLEHISLVMDRDSAEASDAVTIMTLHSAKGLEYNTVFLPGWEDGTFPS
QRSMDESGRAGLEEERRLGYVGITRGRKRVRISAAQNRRIHGLWQSAIPSRFIDELPPDV
LDVTDRGSAYGGYSYGGGASSRFNKADPFESVYETPGWQRARAQQATRKGGGPLTIEGEL
VARSVDLGSQSSGFEVSDRVFHLKFGYGEVMNIEGNKLTIEFDKAGTKKVLESFVTKG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccgcacccctttaccgtcccggcgccgggccgaataccagccgccttcaa
caggcgccagcgatggactatctggctggcctcaaccccgagcagcgcgacgccgtgctt
gcaacggaaggcccggttctggtgctggcgggtgccggtaccggcaagacgcgggtgctg
acgacacgtatcgcccacattctcaaccagcgccttgcctggggcagccagatcctagcc
gtgacctttaccaacaaggcagcgggcgagatgaaaaagcgcatccatgagcttgtgcca
aacttcgacggcatgccttggatgggcacgttccactcggtttccgcccgcattttgcgc
cagcacgcggaactggtcgatcttaaacccagcttcaccatccttgataccgacgaccag
atccggctgatcaagcagttgctggcggccgaaaacatcgatgaaaagcgctggaccgct
cgcggctttgccgggctgctcgatacctggaagaaccggggctggttgcccaaggacgtg
ccggcgtcggaaagcagcgtcttcgccaatggccgtttgcccaacctttatgcggactac
caggcccgcctcaaaacgctcaacgccgtcgatttcggcgacctgctgcttgaatgcatt
cgcttgttccgcgaacagcccgacgtgcttgccgaataccacaagcgctttaagtacatg
ctggtcgacgaataccaggacagcaacaccgcccagtatctttggctgcgcctcctggcg
cagggccgtcccgcaaacgaggccaatatctgcgtggtcggtgacgatgaccagtcgatc
tacggctggcgcggcgccgaggtggacaacatcctgcgcttcgaaaaggattttccgggc
gccaaggtggtcaagcttgagcgcaactatcgctcgaccgccaatatcctcaaggccgct
tcgaccctgatcgccttcaacgaaggccgcctgggcaagacgctccacaccgatgtcgcc
gaagcgggcgaaccgatctcgttcacccaggtctatgacagcgaggaagaggcgcgcaca
gtcggcgaggaaattgagcagttccagcgcctcggcgaaccgctcaattcaatggccatc
ctggtccgcgcttccttccagatgcgcgagttcgaagaacgcttcatcacgctggggctg
aactaccgcgtcatcggcggtccgcgcttctatgagcgcaaggaaattcgtgatgctctg
gcctatctgcggctggttgcacagccctttgacgatctggctttcgaacgcatcatcaac
gtgcccaagcgtggcctcggcgactcgaccgtcaacatgctgaccgcgacggctcgccac
cagaacgtgccgcttctgcagtcgacgcgcatgctggtggaaaccgaggacctcaagccc
aagcagcgctcggtcctgcgtgccctggtggcgcaattcgacgattggtcctatcgtgcc
gaaagcctgccgccctaccagctggtcgaacagatcctggaagaaagcggctatatggac
atgctttcggcagacaaatccgccgaaagcgagggccgcaaggaaaacctcaaggaactc
agccgttccatggaagagttcgagacgctgggcggctttctcgagcatatatcgctggtc
atggaccgcgacagcgccgaggccagtgatgccgtcaccatcatgacgctccactctgcc
aaggggctcgaatataacacggtattcctgcccggctgggaagacggaacctttccaagc
cagcgctcgatggacgagtcggggcgcgccgggctcgaagaggaacggcgcctcggctat
gtcggcataacccgcggccgcaagcgtgtgcggatttcggcagcgcagaaccggcgcatc
cacgggctctggcaatcggccattccatcgcgcttcatcgacgaactgccgcccgacgtg
ctggacgtcaccgatcgcggctcggcctatggcggctatagctatggcggcggcgcctcg
agccgcttcaacaaggccgaccctttcgaaagcgtctacgaaacgcccggctggcagcgg
gcgcgtgcgcagcaggcaacgcgcaagggtggcgggccgctgaccatagagggcgaactg
gtcgcccgctccgtcgatcttggcagccagtcgagcggcttcgaggtgtccgaccgggta
ttccacctcaagttcggctatggcgaggtgatgaatatcgagggcaataagctgaccatc
gagttcgacaaggcggggaccaagaaggtcttggagagctttgtgacgaagggttag
DBGET
integrated database retrieval system
