Devosia rhizoryzae: JI748_08160
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Entry
JI748_08160 CDS
T09886
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
drh
Devosia rhizoryzae
Pathway
drh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JI748_08160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drh03021
]
JI748_08160
03400 DNA repair and recombination proteins [BR:
drh03400
]
JI748_08160
Enzymes [BR:
drh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JI748_08160
Transcription machinery [BR:
drh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JI748_08160
DNA repair and recombination proteins [BR:
drh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JI748_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
QQR40941
LinkDB
All DBs
Position
complement(1639700..1640068)
Genome browser
AA seq
122 aa
AA seq
DB search
MARVTVEDCIQKVENRFDLVLMAAHRARMISSGGQITVPRDNDKNPVVALREIGDGTISP
EDLREDLIHSLQKYVEVDEPENTAAPLIESAGDDDSINFDTISEEELLRGIESLAPPERR
DD
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgcgtcaccgttgaagactgcattcaaaaggtcgaaaaccgttttgacctcgtc
ctcatggccgcccatcgcgcgcgcatgatttcctctggtggccagatcaccgtcccgcgc
gacaacgacaagaaccccgtcgttgccttgcgcgaaatcggcgatggcaccatttcgccg
gaagatctgcgtgaagacctgatccactcgctgcagaagtatgtggaagtcgacgagccg
gaaaacaccgccgctccgctgatcgaaagcgccggcgacgacgattcgatcaacttcgac
acgatcagcgaagaagaactgctgcgcggcatcgagagcctggctccgccggaacgccgc
gatgactag
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