Devosia rhizoryzae: JI748_09840
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Entry
JI748_09840 CDS
T09886
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
drh
Devosia rhizoryzae
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drh03032
]
JI748_09840
03400 DNA repair and recombination proteins [BR:
drh03400
]
JI748_09840
Enzymes [BR:
drh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JI748_09840
DNA replication proteins [BR:
drh03032
]
Prokaryotic type
DNA Topoisomerases
JI748_09840
DNA repair and recombination proteins [BR:
drh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JI748_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
tRNA_synt_2f
Motif
Other DBs
NCBI-ProteinID:
QQR41180
LinkDB
All DBs
Position
1974072..1975085
Genome browser
AA seq
337 aa
AA seq
DB search
MRADEIGPAPTLAFSSDDSPGWHRVKRGKGVSYVDEDGNKPEEHDLARIRALAIPPAWSD
VWICKDQCGHIQATGRDEKGRKQYRYHAEWTQLRSTNKFETLPAFAKVLPSLRAQVESDL
RRRSLCFERVVASVVWLLDHSLIRVGNAAYARQNKSFGLTTLRTKHVDITGHKLHFQFKG
KSGKQWNLHLADRRIANTLKSLQDIPGQHLFTYECDTGYSTISSRDVNDYLAAFAGPDFT
AKHFRTWAGTVRAFGLFADTGVPETKTAQNRAMNAIIDQVAARLGNTRAVCRSAYIHPAL
GETWLKGELHRSGRLKPIEGLDEDEVETAAFLRKLDK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgacgaaattggtcctgccccaacccttgccttttcctccgacgacagcccc
ggctggcatcgggtcaagcgcggcaaaggggtgagctatgtcgatgaagacggcaacaag
cccgaagagcatgatcttgcccgcatccgggccctcgccattccccccgcctggtccgac
gtctggatctgcaaggatcagtgcgggcatatccaggccaccggccgcgatgaaaaaggc
cgcaagcagtaccgctaccatgccgaatggacgcagctgcgctcgaccaacaagttcgag
acgctgcccgccttcgccaaggtgctgccgagcctccgcgcccaggtcgagagcgacctc
cgccgccgcagcctctgcttcgaacgcgtcgtcgcctcggtggtctggctgctcgatcat
agcttgatccgcgtcggcaacgccgcctatgcccggcagaacaagagctttggcctaacg
accctgcgcaccaagcatgtcgacatcaccggccacaagctgcacttccagttcaagggc
aagtcgggcaagcagtggaacctccatcttgccgatcgccgcattgccaatacgctgaag
tcgctgcaggacattccgggccagcaccttttcacctacgaatgcgacaccggctactcg
acgatctcttcgcgcgacgtcaacgactaccttgccgcctttgccggccccgactttacg
gccaagcatttccgcacctgggcgggcacggtgcgcgccttcgggctttttgccgatacc
ggggtgccggagaccaagacggcgcagaaccgcgcgatgaacgccatcatcgaccaggtg
gcggcgcggcttggcaatacgagagcagtgtgccgctcggcctatattcacccggcgctt
ggcgagacctggctcaagggcgagctgcaccgatccggccggttgaagccgatcgagggt
ctcgacgaagacgaagtcgaaaccgccgccttcctgcgcaagctcgacaaatag
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