Devosia rhizoryzae: JI748_10295
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Entry
JI748_10295 CDS
T09886
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
drh
Devosia rhizoryzae
Pathway
drh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JI748_10295 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drh03019
]
JI748_10295 (recQ)
03400 DNA repair and recombination proteins [BR:
drh03400
]
JI748_10295 (recQ)
Enzymes [BR:
drh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI748_10295 (recQ)
Messenger RNA biogenesis [BR:
drh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JI748_10295 (recQ)
DNA repair and recombination proteins [BR:
drh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JI748_10295 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQR38178
LinkDB
All DBs
Position
2063725..2065581
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AA seq
618 aa
AA seq
DB search
MEAIESYDLFSPQRQERPTPLAVLRDIFGHKEFRGQQHEVIDHVAGGGDAVVLFPTGAGK
SMCYQIPAICRRGVGIVVSPLIALMRDQVEALKQAGVAAAALNSSLSQEESAEVRGKLRR
GELDLLYVAPERVATPGFANMLSGADISLFAIDEAHCVSQWGHDFRPEYRELIHLVELFP
GVPRVALTATADPTTREDIIERLGLEQAKVFTTSFDRPNISYSIVERDKPREQLLDFLSG
HKGESGIVYCLSRAKVEDTAEWLSAKGIPALPYHAGLPAHVRSANQDAFLKDDNICMVAT
VAFGMGIDKPDVRYVAHMDLPASIESYYQETGRAGRDGLPSDAWMSYGMADVVQRRRMID
EGNAPDEVKRLEHGKLNALLGVCETASCRRQAILSHFGEAYAGACGNCDTCRSPVESWDG
TEAAIKALAAIYRTGQRFGAAHVIDVLVGKETEKVTRFGHQNQPVFGQGRELDAKAWQSV
VRQITAMGLVVVDHANHGALTLGADARAVFKRERLVTLRKDRPKKSVEVRRSLANAVVVP
EHARPLFEALRGERTRIAKAQGVPPYVIFHDATLRAMALAEPTYPHDMLNLPGVGQGKLD
RYGDEFLAVVRRHLAEGA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtggaagccattgagtcttacgatctgttttcgccccagcgccaggagcggccgacgccg
cttgccgtgctgcgcgacatctttgggcacaaggaattccgcgggcagcagcacgaggtg
atcgaccatgtcgccggtggcggcgatgccgtggtgctgtttccgaccggcgccggcaag
tcgatgtgctaccagatcccggctatctgccggcgcggtgtcggcatcgtcgtttcgccg
ctgatcgccttgatgcgggaccaggtcgaggcgctgaaacaagctggcgtcgccgcggcg
gcgctcaattcctcgctgtcgcaggaagaatcggccgaagtgcgaggcaaattgcggcgc
ggcgagctcgatcttctttatgtcgcgcccgagcgggtggcgacgccgggctttgccaat
atgctctcgggcgccgacatttcgctgttcgccatcgacgaggcccattgcgtgtcgcaa
tgggggcacgatttccggcccgaatatcgcgagctgatccacctggtcgagctctttccg
ggggtgccgcgcgttgcgctgacggcgacggccgatcccacgacgcgcgaagacattatc
gagcggctggggctcgagcaggcaaaggtctttaccaccagctttgaccggcccaacatt
tcctattccatcgtcgagcgcgacaagccgcgcgagcagttgctcgactttctttccggc
cataagggcgaaagcggcatcgtttattgtctctcgcgcgccaaggtcgaggacacggcc
gagtggctttcggccaagggtattcccgccctgccctaccatgccggccttcccgcccat
gtccgcagcgccaaccaggacgcatttctaaaggacgacaatatctgcatggtcgcgacc
gtggccttcggcatgggcatagacaagccggacgtgcgctatgtcgcccatatggacctg
ccggcctcgatcgaaagctattaccaggagaccggccgcgccggccgcgacgggctgccg
tcggatgcctggatgagctatggcatggccgatgtcgtgcaacgccgccgcatgatcgac
gagggcaatgcgcctgatgaggtcaagcgcctcgaacacggtaagctcaatgcgctgctc
ggcgtctgcgaaaccgcttcctgccgccgccaggccatactcagccatttcggcgaggcc
tatgccggggcttgcggcaattgcgacacctgccgctcgcccgtggaatcgtgggacggc
acggaagccgcgatcaaggccctggccgcaatctaccggactggccagcgcttcggcgcg
gcgcatgtgatcgatgtcctggtcggcaaggaaaccgaaaaagtcacccgcttcgggcac
cagaaccagccggtcttcggccagggccgcgaactcgatgcaaaagcctggcaatcggtt
gtccggcagatcacggccatgggtctggtcgtcgtcgatcatgccaatcacggcgcgctg
accctgggggcggatgcccgggcggtgttcaagcgcgagcggctcgtgaccttgcgcaag
gatcggccgaagaaaagcgtcgaggtccggcgatcgctcgccaatgccgtcgtcgtgccg
gagcatgcgcggcccttgttcgaagcgctgcgcggcgagcgcacccgcatcgccaaggca
cagggcgtgccgccctacgtgatctttcacgacgcgaccctgcgcgccatggcgctggcg
gaaccgacgtatccccatgatatgctgaacctgcccggcgtcgggcaaggcaagctcgac
cgctatggcgatgaatttctggccgtggtgcggcggcatttggcggagggcgcatga
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