Devosia rhizoryzae: JI748_11770
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Entry
JI748_11770 CDS
T09886
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
drh
Devosia rhizoryzae
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
drh03000
]
JI748_11770
Transcription factors [BR:
drh03000
]
Prokaryotic type
Helix-turn-helix
IclR family
JI748_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
MarR_2
IclR_C
HTH_27
HTH_5
Rrf2
MarR
HTH_24
TrmB
DUF4423
RNA_pol_Rpc34
Motif
Other DBs
NCBI-ProteinID:
QQR38454
LinkDB
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Position
2396339..2397145
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AA seq
268 aa
AA seq
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MSIRSIERCLNVLLELNQQPINTIAQLHARTRLPKPTLVRILKTLEEAGYVENDSRQGGY
QVSALVTSLSSGYHKSPLVVEAGRAWALAITRKHKWPIAIALPDYTSMVVRFSTVPDSPV
SPFHSTVNRRLQMLTRGMGLAYLAFIESEERDLILEALAKSEDPEDGLSHHPQEVKRLLA
QVHKAGYATRASFVEPRNSNTIAVPIISQEGRVLASLGLTYFKSAFASEQEACERFVPVL
QSAAVAISDDLGRLSRNMSVDVSELGAI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcgatccatcgagcggtgtctcaacgtgttgctggagctcaaccagcagccc
atcaacaccatcgcccagctccatgcccgcacccgcctgcccaagccgacgctggtccgc
atcctcaagacgctcgaagaagccggctatgtcgaaaacgactcccggcagggcggatat
caggtcagcgccctggtgacctcgctcagttcgggctaccacaagagcccgctggtcgtt
gaagcaggccgcgcctgggctctcgccattacccgcaagcacaaatggcccatcgccata
gccctccccgactataccagcatggtggtacggttcagcacggtgccggatagtccggtc
tcgccatttcacagcaccgtcaaccggcgcctgcagatgctgacgcgtggcatgggcctg
gcctatctggcctttatcgaaagcgaggagcgcgacctgatcctcgaagcgctggccaag
tcggaggaccccgaggacggcctcagccaccatccgcaggaggtcaaacgcctgctggcc
caggtgcacaaggcaggctatgcaacgcgcgcttcctttgtcgagccgcgcaattccaac
accattgccgtgccgatcatcagccaggagggccgtgtgctggcaagcctggggctgacc
tacttcaagtcggcctttgcctcggaacaggaagcctgcgagcgcttcgttcccgtgctt
cagtcagcggcagtggccatctcggacgaccttggccgcctgtccaggaacatgtcggta
gacgtgtcggaactgggagcgatctag
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