Devosia rhizoryzae: JI748_12725
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Entry
JI748_12725 CDS
T09886
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
drh
Devosia rhizoryzae
Pathway
drh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI748_12725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drh02000
]
JI748_12725
Transporters [BR:
drh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JI748_12725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Bd3614_N
Motif
Other DBs
NCBI-ProteinID:
QQR38624
LinkDB
All DBs
Position
complement(2595893..2597503)
Genome browser
AA seq
536 aa
AA seq
DB search
MRLYKTLVAAALGTVMSVSGAFAETPADTLVIADAIDDIITLDPAEVSEVGGVLMSQQMY
QPLVTFDPADPTKIVGVLAESWEVSEDGKTFTFTMNPDAKFASGNPVTAKDAEYSLQRVI
LLDSRISFILTQFGITKENVAEKIKATDDATLVIEVDQKYAQSFVLYVLSSFTGGIVDSV
LVKEHEGTREDGSNDYGNAWLKADNSAGSGPYVLTKWDPKVSILMSRNENYWGEAPGVER
IFLQHMPESATQRLALEKGDIDIANKLGPDDIGAVEGNADIQVLEGNSSTIYYMGANVRD
EALSNPKVIEAMKYLIDYDGIAETIGRGTIKVHQTMIPDGFLGGNIDYNPYSFDLEKAKA
LLEESGVSLPITLDTVVWNVPPYPDYAQAVQATMAQAGINLDLQVVDGGPWLDRYRSHDL
DIWVGLWGPDYPDPHSNAKAFTVNDATDPDGAKGNLADRFGWNSGPLSDQVLAAVQEQDT
EKRAEMYEEIQRAHTDSSPFLYMFQDSRRVAMRSDVKGVVLGITFSDDRYGAVTKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtacaagacgctcgttgcggcggctctcggcacggtcatgtccgtgtcgggc
gcctttgccgagacacccgccgacacgctcgtgattgccgatgcgatcgacgacatcatc
acgctcgatccggccgaagtgtccgaggtcggtggcgtgctgatgagccagcagatgtat
cagccgctggtcaccttcgatcccgccgatccgaccaagatcgtcggcgtcctggccgaa
agctgggaagtgtccgaggacggcaagaccttcaccttcaccatgaacccggacgccaag
ttcgcctcgggcaatccggtgacggcgaaggacgccgaatattcgctgcagcgcgtcatc
ctgctcgatagccgcatttccttcatcctgacccagttcggcatcaccaaggaaaacgtc
gccgaaaagatcaaggcaacggatgatgcgaccctggtcatcgaagtcgaccagaaatac
gcccagagcttcgtgctctacgttctctcgtccttcaccggcggcatcgtcgatagcgtc
ctcgtcaaggaacacgaaggcacccgcgaagacggcagcaacgactatggcaatgcgtgg
ctcaaggctgacaattctgctggttccggcccctatgtgctgaccaagtgggatccaaaa
gtctcgatcctgatgtcgcgcaacgaaaactactggggcgaagcgccgggcgtcgagcgc
atcttcctccagcacatgccggaaagcgccacccagcgcctggcgcttgaaaagggcgac
atcgacattgccaacaagctcggtcccgacgatatcggcgccgtcgagggcaatgcggat
atccaggtgctcgaaggcaattcctcgaccatctactacatgggcgccaatgtccgcgat
gaggccttgagcaatcccaaggtcatcgaagcgatgaaatatctcatcgactatgatggc
attgccgaaaccatcggccgcggcacgatcaaggtgcaccagaccatgatccccgacggg
ttcctgggcggcaatatcgactacaatccctattccttcgacctcgaaaaggccaaggcg
ctgctcgaagagtccggcgtcagcctgccgatcacgctcgataccgtggtgtggaacgtg
ccgccctatcccgattacgcccaggccgttcaggcgaccatggcgcaggccggcatcaac
ctcgacctccaggtcgtcgatggcggcccgtggctcgatcgttatcgttcgcacgatctc
gatatctgggtgggtctctggggtccggactatccagatccgcattccaacgccaaggcc
ttcaccgtcaacgacgccaccgatcccgatggcgccaagggcaaccttgccgatcgcttc
ggctggaattcgggcccgctgtccgaccaggtcctggctgccgtccaggaacaggacacc
gaaaagcgcgccgaaatgtatgaagaaatccagcgcgcccataccgacagctcgccattc
ctttatatgttccaggatagccgccgcgtcgccatgcgctccgacgtcaagggtgtcgtc
ctcggcatcaccttctcggacgaccgctacggtgccgtgaccaaggaatag
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