Devosia rhizoryzae: JI748_13625
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Entry
JI748_13625 CDS
T09886
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
drh
Devosia rhizoryzae
Pathway
drh03420
Nucleotide excision repair
drh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JI748_13625
03430 Mismatch repair
JI748_13625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drh03400
]
JI748_13625
Enzymes [BR:
drh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JI748_13625
DNA repair and recombination proteins [BR:
drh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JI748_13625
MMR (mismatch excision repair)
Other MMR factors
JI748_13625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
HHH
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQR38783
LinkDB
All DBs
Position
complement(2793099..2795162)
Genome browser
AA seq
687 aa
AA seq
DB search
MPSDTAYLEALNPNQRLAVEHGAGHAAPGPLLVIAGAGSGKTNTLAHRVAHLIRHGADPR
RILLLTFSRRAASEMSRRVERIAGSVLGLGSGAITDALTWAGTFHGVGARLLREHAQQIG
LDPAFTIHDREDSADLMNLVRHELRFSETKTRFPAKGTCLAIYSRVVNAQADLDEVLKTV
FPWCAMWTAELRTLFGAYVAAKQAQNVLDYDDLLLYWAGMMAEPAIAAQVSGLFDHILVD
EYQDTNRLQASVLLALRPDGRGLTVVGDDAQSIYSFRAATVRNILDFPSSFSPAAQIVTL
DRNYRSTQPILAAANAVIDQASERFTKNLWTERLSAQKPMLVTVKDEADQVGYIARSVLE
ARETGTPLKQQAVLFRSSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHIKDMLAVLRWAE
NPRDRVAGFRVLQLMPGIGPGTAGRILDALGASADPAWALGEVPPPAKAGQHWPDLVAMV
GRLASRELSWPLELGYVRQWYEPLLEAAYEDAPSRVADIVQLEQIAAGYPGRERFLTELT
LDPPDATSDQAGVPLKDDDYLILSTIHSAKGQEWKAVHVLNVVDGCIPSDLGTGSAHELE
EERRLLYVAMTRAKDELHLLVPQRFYVTQQARNGDRHLYAQRTRFIPRAMTALFEDILWP
PVTPIRAGLMPGQPAVVDMAAKMRSMW
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
gtgccttctgacactgcctatctcgaagctcttaatccgaaccagcgtctcgcggtcgaa
catggtgcgggccatgccgcgcccggaccgttgctggtgattgcgggggctgggtcaggc
aagaccaatactttggcccatcgcgtggcgcatctgatccgtcatggtgctgatccccgg
cgtattctgctgctgaccttttcccgtcgcgcggcatcggagatgagccggcgggtggag
cgtattgccggctctgttctgggccttggttccggcgcgatcaccgacgcactcacctgg
gccggcacgttccatggcgtcggggcgcggctattgcgcgaacatgcccagcagatcggt
ctcgatccggcgtttaccatccatgaccgcgaagactctgccgacctcatgaacctggtg
cggcacgaactgcgcttcagcgaaaccaagacgcgctttcccgccaagggcacgtgcctt
gcgatctattcgcgtgtcgtcaatgcgcaggccgatcttgatgaggtgctgaaaaccgtc
tttccctggtgcgcaatgtggacggccgagctgcgaacgttgtttggtgcctatgtggcg
gccaagcaggcgcagaacgttctcgattacgatgacctcctgctctactgggccggcatg
atggcggagcccgccattgccgcgcaggtatccggcctcttcgaccacatcctcgttgat
gagtaccaggacacaaaccggctgcaggcctccgtgttgctggccctgcgccccgacggg
cgcgggctgacggtggttggggatgacgcgcagtcgatctattccttccgcgccgccacc
gtgcgcaacatcctcgatttcccgtcgagcttttcgccggcggcgcagatcgtcacattg
gaccgcaactaccgctcgacccagccgatccttgcagccgccaatgctgtgattgatcaa
gcgtccgagcgcttcaccaagaacctttggaccgagcgtctgtccgcgcaaaagcccatg
ctggtcaccgtcaaggacgaagccgatcaggtcggctatatcgccaggtcggtgctggaa
gcccgcgaaaccggaacgccgcttaagcaacaggcggtgctgttccgctcctcttcccat
tcgggcccgctcgaaatcgagctgacgcggcgcaacatccccttcgtcaagttcgggggg
ctcaagtttctcgatgccgcgcacatcaaggacatgctggcggtgctgcgctgggccgag
aacccgcgcgatcgcgtggccgggtttcgggtcttgcagctgatgcccggcatcggtccg
ggcactgcggggcggatcctcgatgcgctcggcgccagtgccgatccagcctgggccctg
ggggaagtgccgccgcctgcaaaggcgggtcagcattggcccgacctcgtcgccatggtc
gggcgccttgcgagccgcgaactgagttggccgctcgaactgggctatgtccgtcaatgg
tatgagccactgctggaagcggcttacgaggatgcgccaagccgcgtggccgacatcgtg
cagctcgaacagatcgccgccgggtatccaggccgcgagcgcttcctgaccgaattgacc
cttgatccgcctgacgccaccagcgaccaggccggcgtgccgctcaaggacgatgattac
ctgatcctttcaaccatccactcggccaaggggcaggagtggaaggcagtgcatgtcctc
aatgttgtcgacggctgtatcccctccgatctcggcaccggttcggcccatgaactcgaa
gaagagcggcggcttctgtatgtggcgatgacccgcgccaaggatgaactccatctgctg
gtgccgcagcgcttttatgtcacccagcaggcgcggaacggcgaccgacacctttacgcg
cagcgcacgcgctttattccacgggcgatgacggcactgttcgaggacatcctctggccg
cctgtaacgcccatccgggccggattgatgcccggccagcctgccgtggtggacatggcg
gccaagatgcgcagcatgtggtaa
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