Devosia rhizosphaerae: QOV41_00020
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Entry
QOV41_00020 CDS
T10830
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dri Devosia rhizosphaerae
Brite
Enzymes [BR:
dri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QOV41_00020 (gyrB)
DNA replication proteins [BR:
dri03032
]
Prokaryotic type
DNA Topoisomerases
QOV41_00020 (gyrB)
DNA repair and recombination proteins [BR:
dri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QOV41_00020 (gyrB)
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Other DBs
NCBI-ProteinID:
WIJ25202
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Position
4433..6886
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AA seq
817 aa
AA seq
DB search
MTDSENILPNEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALA
GHADLVTVTLNADGSVTVIDNGRGIPTDIHKEEGVSAAEVIMTQLHAGGKFDQNSYKVSG
GLHGVGVSVVNALSIWLRLKIRRDGKIHEMSFTHGDADAPLAQIGTYEPNKQPGTYEGRS
GTEITFQPSQQTFTMVEFDFKTLEHRLRELAFLNSGVRILLADRRHPEPVEVELFYEGGL
EAFVRYLDKAKQPVIDAPITMISEKDGITVEVALQWNDSYHENVLCFTNNIPQRDGGTHL
AGLRGALTRQVTGYAESSGIAKKEKVSVTGDDTREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPVVENIVNEKLGQWFEEHPNEAKIIVGKVAEAAAAREAARKARELTRRKGALEISS
LPGKLADCQERDPAKSEIFIVEGDSAGGSAKQGRDRSNQAVLPLRGKILNVERARFDRMI
SSDQVGTLITALGTGIGREEFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQTPALI
ERGHIYIAQPPLYKATRGRSEQYLKDERALEDYLLDAGLEEAVFKTRDGVEHAGPDLMSI
LQQARDITHAINNLNTRYNRSLVEQAAIVGGLDPEGLSDPSRNEETIGRVANRLDRISDE
LERGWTGELTDSEDLAFSRTIRGVTERHLIDKALLQSADARRLRQLASRLDELFGGVPTL
TRKGESTPIFGPSSLFKGVTDAGRKGVSLQRYKGLGEMNALQLWETTLDPNARTLLKVQI
DESSEADSIFTALMGDLVEPRRDFIQDNALSVSNLDV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatagcgaaaacatccttcccaacgaatacggcgcagacagcatcaaagtgctc
aagggcctcgacgcggtgcgcaagcgcccaggcatgtatatcggggatacggatgacggc
tccggcctgcatcacatggtctatgaggtggtcgacaacgccatcgacgaggcgctagcc
ggtcatgccgacctggtgacggtgaccctcaacgctgacggttcggtcaccgtgatcgac
aatggtcggggtatccccaccgacatccacaaggaagagggcgtctcggcggctgaggtc
atcatgacccagttgcatgccggcggtaagttcgaccagaactcctacaaggtctcgggc
ggcctccatggcgtgggcgtttcggtggtcaatgccctttcgatctggctccggctcaag
atccgccgcgacggcaagatccacgagatgagctttacccatggcgatgccgatgcgccg
ctggcgcagatcggcacctatgagcccaacaagcagccgggcacctatgaaggccgctcg
ggcaccgagatcactttccagcccagccagcaaaccttcaccatggtggagttcgacttc
aagacgctggagcaccgcctgcgcgagctggccttcctcaattctggcgtgcgcattctc
ctggctgatcgccggcaccccgagccggtcgaggttgagctgttctatgagggtgggctc
gaagccttcgtgcgctatctcgacaaggccaagcagcccgtcatcgatgcgccgatcacc
atgatcagcgagaaggacggcattaccgtcgaagtggcgctgcaatggaacgacagctac
cacgaaaacgtgctgtgcttcaccaacaacattccccagcgcgacggcggtacgcactta
gccggtttgcgtggcgcgctgacgcggcaggtgaccggctatgccgagtcttctggtatc
gccaagaaggaaaaggtctcggttaccggcgacgatacgcgcgaaggactgacctgcgtc
ctatcggtcaaggttcctgatcccaagttttccagccaaaccaaggacaagctcgtctcg
tccgaagtgcggccggtggtcgagaacatcgtcaacgagaagctggggcagtggttcgaa
gaacaccccaacgaagccaagatcatcgtgggcaaggtcgccgaagccgcagccgcgcgt
gaagccgcacgcaaggcgcgcgaactgacgcggcgcaagggagcgctcgaaatctcctcg
ctgcccggcaagctcgccgactgccaggaacgcgatcccgccaagagcgaaattttcatc
gtggaaggtgactcggcaggtggctcggccaagcagggccgcgaccgctccaaccaggcc
gtgctgccgctgcgcggcaagatcctcaatgtggagcgggcgcgctttgaccgcatgatc
tcctccgatcaggtcggcacgctgatcacggcgctgggcaccggcatcggccgggaagag
ttcaacgccgacaagctgcgctaccacaaaatcatcatcatgacggacgctgacgtggac
ggcgcccatattcgcacgctgctgctcaccttcttctaccgtcagacgccggccctgatc
gagcgcggccacatctatatcgcgcagccgccgctttataaggcgacgcgcggccgctcc
gagcagtacctcaaggacgaacgcgcactcgaggactatctgctcgatgctggcctcgaa
gaggctgtattcaagacacgcgacggcgtcgagcatgccggaccggacctcatgtccatt
cttcagcaggcgcgcgatatcacgcacgccatcaacaacctcaacacgcgctacaatcgc
agcctcgtcgagcaggcagccattgtgggtggcctcgatcccgagggcctgtccgaccca
tcgcgcaacgaggaaaccattggccgcgtcgccaatcggctcgaccgcatcagcgacgag
ctggaacgtggctggaccggcgaattgaccgacagcgaagatctggccttctcgcgcacc
atccgcggcgtgaccgagcgccacctgatcgacaaggccttgctgcagagcgccgatgcg
cggcgcctgcgccagttggcgagccgtctcgacgagctctttggcggcgtaccgacactg
actcgcaagggcgagagcaccccgatcttcggtccctcctcgctcttcaagggcgtgacg
gatgccggccggaagggcgtatcgctgcagcgttacaaagggctgggcgagatgaacgcc
ctccagctgtgggaaaccacgctcgatcccaatgcgcgcaccttgctcaaggtgcagatc
gacgagtcgagcgaagcggactcgatcttcacggcgcttatgggcgatttggtcgagccc
cggcgcgacttcatccaggacaacgcactgagcgtcagcaatctcgacgtctaa
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