Devosia rhizosphaerae: QOV41_10470
Help
Entry
QOV41_10470 CDS
T10830
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
dri Devosia rhizosphaerae
Pathway
dri03018
RNA degradation
Brite
Enzymes [BR:
dri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QOV41_10470
Messenger RNA biogenesis [BR:
dri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QOV41_10470
Ribosome biogenesis [BR:
dri03009
]
Prokaryotic type
rRNA processing factors
QOV41_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WIJ23506
LinkDB
All DBs
Position
complement(2086487..2089213)
Genome browser
AA seq
908 aa
AA seq
DB search
MATKRMLVDAIHPEETRIVVTAGNRLEEFDFESATRRQLRGNIYLAKVTRVEPSLQAAFV
EYGGNRHGFLAFSEIHPDYYQIPVADREALLREEEAEEHQDETEDTPDASAQGESTGDDS
DAEAHDTEEGNHIEQAPANSEPVESVGGADALEEVPERRRSSANRRHYKIQEVIKRRQVM
LVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAADRKRLKEITSDLE
VPQGMGVILRTAGASRTKAEVKRDFEYLMRLWESVRTLTLKSQAPCLVYEEGSLIKRTIR
DLYNKDIDEVLVAGENAYREAKDFMKMIMPSHSKNVKPYDEEQPLFSKYGIEAQLDQMFS
PTVTLPSGGYIVINPTEALVSIDVNSGRSTKEHNIEDTALQTNLEAAEEVARQLRLRDLA
GLIVIDFIDMMENRSNRAVERKLKECLKDDRARIQVGRISHFGLMEMSRQRIRFGVVESS
THKCPICEGTGLVRSTESMALMIMRHIEDHVLRKQGQSINVKVPVEVALYILNFKRETLI
ALEQRNALSITITADGKMTGHQFAIEKGEARVATYVEQRTVEHVRVDSAIIEDADDEDVA
DEIEVEAEEETEERTATAENGEGRNRRRRRRRRGGADREDRPQRAAAEVNETEGESVGDS
DSEGDESEEGVARPQGEASGDDEPRRRRRRGRRGGRRNRRDIEEGAERPATGEVEADGEA
ELTMSEASEVAEVLLAQDEIVAREEAAAEPSATPETSEPLAEAPVEKPKRGRRKKVIETE
EGAPLEAAPVAAEAPAEEEKPKRKPRTRKPKAEAAEIAPEAAVAEAVAAPEAVAAPEATA
PAPVESPQEQAAEAAAPDASSRPRREKKELPAEGIVVSSSTPKPESKEAAPEPEKKKVGW
WQRRLGLG
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaagagaatgctggtggatgccatccacccggaagaaacacggattgtcgtc
acagcgggtaacaggctcgaagagttcgattttgaatcggcgacacgtcgccagctgcgc
ggcaatatctacctcgccaaggtcacgcgcgtagaaccgtcgctacaagcggccttcgtc
gagtatggcggcaatcgccacgggttcctcgccttcagcgaaatccacccggactactac
caaatcccggttgctgatcgcgaagccttgctgcgcgaggaagaggccgaggagcaccaa
gacgagactgaggacacccctgacgcttctgctcagggcgaaagcaccggagacgacagc
gacgccgaagcgcacgacaccgaagagggcaaccacatcgaacaggcgccggccaattcc
gagccggttgaatcggtcggcggcgccgacgcactcgaggaagttcccgagcggcggaga
tcctctgccaatcgtcggcattacaagatccaggaagtgatcaagcgccggcaggtgatg
ctggtgcaggtggtcaaggaagagcgcggcaacaagggcgcggctctcaccacctatctg
tcgctcgctgggcgttattcggttctgatgcccaacactgctcgcggcggcggcatttcc
cgcaagatcaccaatgctgctgaccgcaagcgcctcaaggaaatcacctccgatctggaa
gtgccgcagggcatgggcgtcattctgcgcacggccggtgcttcgcgcaccaaggcggaa
gtgaagcgggatttcgaatatctaatgcgcctttgggagagtgttcgcaccctaaccctt
aagtcgcaggcaccgtgcctggtctacgaggaaggctcgctgatcaagcggaccattcgc
gacctctacaacaaggacatcgacgaagttctggtcgctggcgagaacgcttatcgtgaa
gccaaagacttcatgaagatgatcatgccgtcgcactccaagaacgtgaagccgtatgac
gaggagcagccgctcttttccaaatacggcatcgaagcacagctcgaccagatgttctcc
ccgactgtaactctgccctccggcggttacatcgtcatcaatccgaccgaagcactggtc
tcgatcgacgtgaactcaggtcgctccacaaaggagcacaacatcgaggacaccgcgctc
cagaccaatttggaagcggccgaggaagtcgcgcggcagttgcgcctgcgcgacctcgct
ggactgatcgtcatcgacttcatcgacatgatggagaaccgttccaaccgggcagtcgag
cgcaagctcaaggaatgcctcaaggacgatcgcgctcgcatccaggtgggccgcatcagc
cattttggcctgatggaaatgagccggcagcgcatccgcttcggcgtggtggaaagctcc
acgcacaagtgtccgatctgtgagggcacaggtctcgtgcgctccaccgagtccatggcg
ctgatgatcatgcggcacatcgaagatcacgtgctgcgcaagcagggccagtcgatcaac
gtgaaggtgccggtcgaagtcgccctctacattctcaactttaagcgcgagacgctgatt
gcactcgagcagcgcaacgcgctctcgatcaccatcactgccgacggcaagatgaccggg
caccagttcgccatcgaaaagggcgaggcccgcgtcgcgacctatgtcgagcagcgcact
gttgaacatgtgcgcgtcgacagcgctatcatcgaggatgccgacgacgaagacgtcgcc
gatgagatcgaggttgaagccgaagaagaaaccgaagagcgtaccgcaactgccgagaac
ggagagggccgcaaccgccgccgccgccgccgtcgtcgcggcggggccgaccgggaagat
cgcccacagcgagccgccgccgaggtgaacgagaccgagggcgagtctgtcggtgacagt
gactcggaaggcgatgagagcgaagagggtgtagcacgtcctcagggcgaggcgtctggc
gatgacgagccgcgtcgccgccgtcgtcgtgggcgccgtggcggccgccgcaatcgccgc
gacatcgaggaaggcgccgagcgccctgccacgggcgaagtcgaggcggatggcgaagcc
gaactcaccatgagtgaagccagcgaagtcgccgaagtgttgctggcgcaggatgagatc
gtcgcccgcgaggaggctgcagccgaaccctcggcaactccggaaacctcagaacccctc
gcggaagcacctgtcgagaagcccaagcgcggtcgccgcaagaaggtcatcgagaccgag
gaaggcgctccgctcgaggccgctccagtggcggcagaagcccctgccgaggaagagaag
ccgaagcgcaagccgcgcactcgcaagcccaaggcagaagcggcggagattgctcctgaa
gcggcagtggcggaagcggtggcagcccccgaggcagttgctgcccctgaggccaccgcg
cctgcgccggtagagtctccgcaagaacaggccgctgaagccgccgcccccgacgcgtct
tctcgccctcgccgcgaaaagaaggagctacctgctgaaggcatcgtggtctcttcgagc
acgcccaagccggagagcaaagaggctgcgcccgaaccggaaaagaaaaaggtcggctgg
tggcagcgccggctcggtctcggctaa
DBGET
integrated database retrieval system
