Devosia rhizosphaerae: QOV41_11310
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Entry
QOV41_11310 CDS
T10830
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dri Devosia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
dri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dri03032
]
QOV41_11310 (topA)
03400 DNA repair and recombination proteins [BR:
dri03400
]
QOV41_11310 (topA)
Enzymes [BR:
dri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QOV41_11310 (topA)
DNA replication proteins [BR:
dri03032
]
Prokaryotic type
DNA Topoisomerases
QOV41_11310 (topA)
DNA repair and recombination proteins [BR:
dri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QOV41_11310 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WIJ23658
LinkDB
All DBs
Position
2284773..2287400
Genome browser
AA seq
875 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGKDYEVLASFGHIRDLPSKDGSVRPDEDFAMSWEVDTAAKK
RVADIANALKNADGLILATDPDREGEAISWHIMDVLRQKKALKKDTPVQRVVFNAITKDA
VTAAMANPRDIDMPLVDAYLARRALDYLVGFTLSPILWRKLPGSRSAGRVQSVALRLVSE
RESEIERFKPEEYWSVEAKLAQQGKSFLARLFSVDGKRTDKLDIKTGEDAAAIKQLIEKG
QFNVTNVEKKPTKRNPYAPFTTSSLQQDASSRVGFSPSRTMQIAQRLYEDGLITYMRTDG
VQMAPEAIGMARSVIGKYFGEEYLPEKARIYQTKAKNAQEAHEAIRPTDMFKRPENLNLD
ADQAKLYGLIWRRTLASQMRSAEIDRTTASIAVNVPGRTVELRATGSVVTFPGFLTLYGV
EAKSDDDNEDEESRELPPLAVGDKPDLQGVDIEQHFTQPPSRYTEASLIKKMEELGIGRP
STYAATLTTLKDRDYVRLEGKALHPEDRGRIVTAFLESFFNRYVEYGFTAGLEEQLDEIS
AGKLDYKQVLRDFWRDFTAATEEIKDLRVSEVLDALNDLLADHIFPPKADGGDPRRCPTC
GTGTLSLKLGKFGAFIGCSNYPECKHTMQLSDAATGQSSEAAPGDGVLGTDPESGEEVHL
KTGRFGPYVQLGDSKEPKRSSLPRGWEATTLTLEKALQLLSLPREVGLHPESGQPITAGI
GRYGPFILHDGKYANLPDVEEVFTVGINRAVDLIAQKAAGGFSRGKGAIPAAIQTFEHDN
GSVTVRAGRYGPYVNQGKVNATIPKDVKPEDVTLAQALEWIAARAEATGTKIKKAPAKKA
AAKKPAAKKAAPKKATTAKKAAPKKKTAADEDIPF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgtcgttgaaagtccggctaaagccaagacaatcaacaaatatttgggc
aaggactatgaagtcctggccagcttcggccatatccgggatctgccgtccaaggacggt
tcggtgcgtcccgacgaagattttgccatgtcctgggaggtcgacaccgccgccaagaag
cgggtcgccgacatcgccaatgccctcaaaaatgctgacggactgatcctcgcaaccgac
ccggatcgtgagggagaagccatttcctggcacatcatggatgtgctccggcagaagaaa
gcgcttaagaaggacacccccgtccagcgcgtggtgttcaacgccatcaccaaggatgcg
gtgaccgcagccatggccaatccccgcgacatcgacatgccgctggtggatgcctatctc
gcccgccgtgcgctcgattaccttgtgggctttaccttgtcgcccattctctggcgcaag
ctccccggctcacgctcggcaggccgcgtgcagtcggtggcgttgcgccttgtctcggaa
cgcgaatccgagatcgaaaggttcaaaccggaggaatactggtccgttgaggccaagctg
gcccagcagggcaagagctttcttgcgcgcctgttctcggtcgacggcaagcggacagac
aagctcgacatcaagaccggcgaagacgcggcagcgatcaagcagctgatcgaaaaaggc
cagttcaacgtcaccaacgttgagaagaagccgaccaagcgcaatccctatgcgcctttc
accacctcttcgctgcagcaggatgcgtcttcgcgcgtcggcttctcgccgtcccggacc
atgcagatcgcacagcgcctctacgaggatggcttgattacctatatgcgaaccgacggc
gtgcagatggcgcctgaggccatcggcatggcacgctccgtgatcggcaagtatttcggc
gaagaataccttcccgaaaaagcccgtatctaccagaccaaggccaagaacgcacaggaa
gcgcacgaggccatccgccccaccgatatgttcaagcggcccgagaacctcaatctcgat
gccgaccaggccaagctctatgggctgatctggcgccgcaccctcgcctcgcagatgcgt
tctgctgagatcgatcgcacgacggcgagcatcgcggtgaacgtgccgggccgcacggtg
gagctgcgtgcaaccggttcggtcgtcaccttccccggctttctcaccctttatggggtc
gaagcgaagtcggacgacgacaacgaagacgaggagagccgcgaattgccgccgctggcc
gtcggcgacaagccggaccttcagggcgtcgacatcgagcagcacttcactcagccgcct
tcgcgctacaccgaagccagcctgatcaagaagatggaggagctcggcatcgggcgcccc
tcgacctatgctgcgacgctgaccacccttaaagatcgcgactatgtccggctcgagggc
aaagcactgcaccccgaggaccgcggacgcatcgtcacggcgtttctcgagagcttcttc
aaccgctatgtcgaatacggcttcactgctgggctcgaagaacagctcgacgagatttcg
gccggcaagctcgactacaaacaggtgctgcgcgacttctggcgcgacttcacggccgca
accgaggagatcaaggaccttcgcgtttccgaagtcctcgacgcgctcaatgatttgctc
gctgaccacatcttcccgcccaaggcggatggcggcgatccacgccgttgccccacctgc
ggcaccggcaccctgtcgctgaagctgggcaagttcggcgctttcatcggctgctcgaac
tatcccgagtgcaagcacaccatgcagctctcggacgcggcgaccgggcaatccagcgag
gcagctccgggcgatggtgtgctcggcaccgatccggaatcgggcgaggaagtgcacctc
aagactggccggttcggcccatatgttcagctcggcgatagcaaggagcccaaaagatct
tccctgccccgcggctgggaggcgacgacgcttacgctcgaaaaagcgctccagctgctt
tcgcttccgcgcgaagtgggtctccacccagagagtgggcagcctataaccgccggtatc
ggtcgttatggtccgttcatcctccacgacggcaaatatgcaaacctgcctgacgtggag
gaagtcttcacggttgggatcaaccgcgccgttgatctcatcgcgcagaaagctgctggc
ggttttagccgcggcaagggtgcgatccccgctgccatccagacattcgagcatgacaac
ggatcggtcactgtgcgcgccggccgctatggtccttatgtcaatcagggcaaggtcaac
gccaccatccccaaggacgtaaagcccgaggatgtgacgctggcgcaggctctcgaatgg
atcgcggcgcgtgccgaggcaaccggcaccaagatcaagaaagctcccgccaaaaaagca
gccgcgaaaaagcctgcagccaagaaggctgcgccgaaaaaggcgaccactgccaagaaa
gctgctccgaagaagaagactgccgctgacgaggatatccccttctag
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