Devosia rhizosphaerae: QOV41_12570
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Entry
QOV41_12570 CDS
T10830
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dri Devosia rhizosphaerae
Pathway
dri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QOV41_12570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dri02000
]
QOV41_12570
Transporters [BR:
dri02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
QOV41_12570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TctC
UCR_Fe-S_N
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WIJ23885
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All DBs
Position
2556185..2557336
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AA seq
383 aa
AA seq
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MKRRDFMITAAAAAAGTAFMPRMSFAAEGVIDWYTSSDSNILDFWTNTVKPAFEAAHPGV
TLNLVDAGDGAGIISIGERAIAAKQSGADPQADFFESGDALLPAGAIDAGVYTNIAEAGL
ANYDKINPLAIQSEYSLPYRGSQVLLAYDTTKLDPADAPKTWDELVAWIKANPGQFVYNR
PDKGGSGGNFVRRAIHQANGLDPSVFTVDNYTQEFGDEALGKAWEILNDIAPSLYDNGAY
ASGNTQSLQLLSQGVVTMIPVWSDQVLQAIDQGVLPETTGLVQLQDLALAGGFTRSIVIE
NGTNRDASLQLADFILSEEIQSAILTELGGFPGVSWDYISPELRERFADIVPQTIPTFPG
GDWEAAINDGWYRNVAPNVDRNS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgcgacttcatgatcacagctgccgcagccgcagctggcacggcatttatg
ccccgcatgtcatttgccgccgaaggcgtgatcgactggtataccagttcagacagcaac
attctcgacttttggacgaatacggtgaagcctgcctttgaagcagctcatccgggagtt
acgctgaacctggtggatgccggtgacggcgcaggcattatctccattggcgaacgggcc
atagcagccaagcagtctggtgcggacccgcaggccgatttctttgagtccggagatgct
ctcctgccagccggcgccatcgatgccggggtctacaccaatatcgccgaagccggcctt
gccaattacgacaagatcaacccgctggcgatccagagcgagtattcgcttccctatcgc
ggcagccaagttctgctggcctatgacacgaccaagctcgaccccgccgacgcccctaag
acgtgggacgagctggttgcctggatcaaagccaatccaggccagttcgtctacaaccgc
cccgacaaaggcggctccggcggcaatttcgtgcgccgcgccatccatcaggccaatggt
ctcgatccttctgtgttcaccgtcgacaactacacacaagagttcggcgatgaggcgctc
ggcaaggcttgggaaatcctcaacgacatcgctccgtccctttatgacaacggcgcctat
gcctcgggcaacacacagtcgctgcagttgttgagccaaggcgtggtcacgatgatcccg
gtctggtccgatcaggtgctgcaggccatcgatcaaggcgtcctcccagagacgaccgga
ctcgtacagctgcaggaccttgcgctggcaggtggctttacgcgctccatcgtcatcgag
aacggtaccaatcgtgatgcgtcgctacagctggccgatttcatcctttcagaagaaatc
cagagcgcaatcctgactgaactcggcggcttcccgggggtcagctgggactacatctcg
cccgaactgcgcgagcgcttcgccgacatcgtgccgcagaccatcccaaccttccccggc
ggagattgggaagctgccatcaatgatggttggtaccgcaacgtcgcccccaacgtcgat
cgcaactcgtga
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