Devosia rhizosphaerae: QOV41_15895
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Entry
QOV41_15895 CDS
T10830
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dri Devosia rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
dri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dri03032
]
QOV41_15895
03400 DNA repair and recombination proteins [BR:
dri03400
]
QOV41_15895
Enzymes [BR:
dri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QOV41_15895
DNA replication proteins [BR:
dri03032
]
Prokaryotic type
DNA Topoisomerases
QOV41_15895
DNA repair and recombination proteins [BR:
dri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QOV41_15895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CFAP107
Motif
Other DBs
NCBI-ProteinID:
WIJ24486
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All DBs
Position
3231372..3232478
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AA seq
368 aa
AA seq
DB search
MSSTTAEPAEISPDIVNPEQAAEAAGLVYVSEEHPGIRRRKSGNGFSYRSPEGTVVKDKD
VLSRIRSLAIPPAWTEVWICADPNGHIQATGRDAKGRKQYRYHPKFREVRDSAKFEHVVE
FARSLPQIRKVVAEHMKLRGLPREKVLAATVHLLESTLIRVGNDDYAKHNKSYGLTTLRD
RHVALNGSELRFQFKGKSGKMWRLNLRDRRLAKIVKACQDLPGQELLQYVDENGDVRDVT
SSDVNAYLREITGKDITAKDFRTWAGTVLAALALDEFEGFDTAAKAKKNVRAAIERVSSR
LGNTPTICRKCYVHPAVLDSYLSGSLVLQVREEIESELRDDLPGLQPEEAAVMVLLQQRL
ADRSSEAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagtactacggcagaaccagcggagatctctcctgacatcgtcaatcccgaacag
gcggccgaggcagcagggctcgtttatgtctcggaggaacaccctggcattcgccgccgt
aagtcgggaaatggctttagctaccggtcaccggagggcacggtcgtcaaggacaaggac
gtgctcagccggatccgctccctggcaatcccgcctgcctggaccgaagtgtggatctgc
gccgatcccaacgggcatatccaagcgacagggcgagacgccaagggccgcaagcaatat
cgctatcatcccaagtttcgggaggttcgtgacagcgccaagttcgagcatgtcgtcgag
tttgcccgatcgcttccccaaattcgcaaggtcgtcgccgaacatatgaagctcaggggc
ttaccgcgagagaaagtgctcgcggcgacggtccacctgctggaatccaccctgatccgt
gtcggtaatgacgactacgccaagcacaacaagagttatggcctgactacccttcgtgac
aggcatgtcgctttgaacggctccgaactgcggttccagttcaagggcaagagcggcaag
atgtggcgcctcaacctgcgtgaccggcggctcgccaaaatcgtaaaggcctgccaggac
ttgccgggccaggaactgctgcaatatgtggacgagaatggcgacgttcgcgacgtgacc
tcgtcggacgtaaacgcctacctgcgtgagattaccggcaaggacatcactgccaaggac
ttccgcacctgggcaggaacagtgctcgcggcgctggcgctcgatgaattcgagggcttc
gacacggccgccaaggccaagaagaatgtccgggcagcgattgagcgggtgtcttcacgg
ctcggcaacacgccaacaatctgccgcaagtgctacgtccacccagcggtcctcgactct
tacctcagcggctcgctggtgctgcaggtccgtgaagaaatcgaaagcgaactgcgcgac
gacctccccggcctgcaaccggaggaagccgccgttatggtgctcctgcagcaaaggctc
gcagatcgctcatccgaagccgcctga
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