Desulforamulus reducens: Dred_0998
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Entry
Dred_0998 CDS
T00494
Name
(GenBank) YD repeat protein
Organism
drm
Desulforamulus reducens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpvB
TcdB_toxin_midC
TcdB_toxin_midN
FG-GAP_3
RHS_repeat
DUF6443
Motif
Other DBs
NCBI-ProteinID:
ABO49533
UniProt:
A4J380
LinkDB
All DBs
Position
1052225..1059901
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AA seq
2558 aa
AA seq
DB search
MGNKIKSFTNQKDKSKISFTELSLPKGGGAIKGIGETFQPDPFSGTANLSIPVQMSPCRD
FEPKISLNYNSGTGNGIFGIGFSISIPNISRKTEKGIPRYNDTDTFLFSNAEDLVSKMVK
NQEGSWVKEERHVEENRVGWKVLSYIPRIEGLFAQIEYWQNSWESFWKVTTKDNTTSIYG
QSENARIADPHDNTRVFKWLIEKTYDAKGNKIEYFYKQEDNENAPDNICEKNRTYATNKY
VSSIKYGNYLDGKGEEAWAFEVVFDYGQYDISDQYLSQPGCNPYIPARKWPARQDPFSSY
RSGFEIRTLRLCRNILMFHHFKKELGETPCLVKATQLTYREPAQQLQNSNNPFTKILQLS
QVELKGFKRKENGSYQFRSMPSLKLTYSCLMPAGGKFDTLKVGNSTAVPVSTGQIRYNFV
DLYGDGIPGLLYSDDKATLYWKPKGNGEYEYPEPAAQFPIEKDLKKGEYTLVSLEGNGRL
DLVVGTPQRGGFYEGNPDGSWHSYRDFATYPLDFTNSHKEMIDMNGDGLADLLLYEDNTA
KIYPSLKKKGYGIPTRASLSEDYPTTSNGYAEEVLSYADMFGDGMAHRVRIRNGSVECWP
NLGHGRFGKRVLFANAPRFGDTLDASRLFLADLDGTGMTDLIYAYPDKVQVFFNQGGNSF
SPPLSIPLPETYSNLDQLGFADVKGNGTACLVFIKTGANAKQYYYDFSEGTKPYLLTGID
NNLGALTNIKYTSSVKYYLHDKMAGKPWKTKLPFPVQVVEKVESIDKISGLKLTTQYKYH
DGFYDSVEREFRGFGFVEETDSEDFFTYAKPGLLENVAFYGLEEEHHVPPVLTKRWYHIG
ACIEEGVVSKQCEKEYYQQDKRGFSIPDSTFDDVVRQGCAETLRQAYRALKGQVIREEVY
ALDYIEGRTGHPYTVTETNFHVRLIQPLIGENRAVFSVYKKETVSFNYERNPNDPQIQHE
FILAVDDFGNVKKSCRVFYPRRATPKDAVSVVHPEQTKIKAIVDLHSFINNSLDFWLLGI
SYESKTLEIGALDLQGQACFSFTKIKDQVGRALQNCIRNDEKFSSDKVQARLLSWERNYF
WNEAQDAPLPLGQITDKALLHHSEEAVFSQELLNTVFNGKATIDMLEKEGGYAFQEGYWW
NRGLVQHYLKDRFLLPWKTENSYTSFPSSLYAKAVYEYDQYSLAPVKATKFITDKITNTS
SALLDYTILLPVQITDINDNVSQAFFDPLGMVIATSVFGTMGGKPAGDRDLKEYKAIPQV
DTTFDDVLANPHKYLQDATTYFYYDLSAWKNKGQPARSVQLTRETHVSDLAAGEKSGMHI
QINYSDGFGREIEKKLKADAGEAVLRDNAGKPVYDAAGKIVKDFAQDRWIVSGRTVYNNK
AKPIKQFIPYFSATPDYELQKDIDPILPKPTIIYYDPLLRVVKTVNPKGFFSKVEFTPWE
EKHFDENDTVRDSVYFKNFKETYSKDPSQEQRDEKDALDKASRSYNTPDTKVLDNTGQTF
LEIRNNLGEITKDILQDIVKGTEVNCQELWDELKSKGYIETGDPPSAMGWVSGKFRPYFK
GFMLGLDGRYKQFEEKIINLLKENCLTTYHELDIQGNVLFSVDPRLYYSNLKDHTDYYNF
KYVYDMQKKPLSVDSADAGLKLSLSNIFGNTVHSWDSRGFHTRKMYDSLQRCVQIGVEGN
DGRGLVLHQAVEKFVYGEFYEEKEEASKDKNLRGQVYKHFDQAGVVTCNLYNLKGKAVQT
DRQFLADYKKEANWDNVNKSSLADELFSIGCSYDALERVISETAPDGSIYTHIYNQAGLL
RKVVVAFKDGSEEEFIKDIQYNANGQRLKIIYGNGVTTEYSYTDPALRLTDILSLKPDSN
NTKDFKGCLLQKIHYTYDPVGNVTRLRDNSYPTVFYNQQKVEPLSDYSYNPLYQLVSATG
RQHPGIFDGSHRDGFKQSKFIPIKSSNPNDGTSLENYRQDYQYDEAGNLTNIRHISSSTS
WTRQLDISKGTNRTVQIASLNGAKNFFKTAYDPCGNMLNLENLASINWSYRNNLSRVDVI
LRENNSSDSEYFIYDSSGQRVRKVSERKCGSLREIEEKLYLGNFEIKRIKKKSDHLESQI
LDRQSLHIMDGKSRIAITDIWLKDDLNRETEKTMERKFRYQLNNNLGSACLEVDEKVNII
SCEEYFPYGGTSFIAGRDKREVKLKEYRYCGKERDDSTGFYYYGARYYLPWLGRWINPDP
AGTVDGLNLYSFVKGNPVNFIDTSGKVGGSWLHLLYGGLTALAVGLIGGAAVGTGDYASP
VVAALAGLAGMLFNKDKSALGALAIAGAGAIGSAVGGYVGRGTMSKLKEKDWQTTSVART
GLVASGLTGGTIGSLGVLAVQAVTRQFNTHNILMGAIAGFGGGILASGAQFGLFKPGDAK
VPTMPVRAELKDLLPYQTRAFDRHYLELNPNPEELITNLKPKHFTVIDEETQQRVKCDLV
AVHGYPRFSFVQSVHGDYNQYIDKEKLVQLLQQAGFPHQDSTTGKNIPIKLATCFGGFWE
SWFSTAQLVADKLGTEVYAHRWPVTVAQQSPWKKFTPN
NT seq
7677 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaaataaagagttttacaaaccaaaaagataaaagcaaaatatccttcacc
gaactgtctctgcccaaagggggaggagccattaaaggaattggtgaaacctttcagcct
gaccctttctctggtactgccaacctttccatccctgttcaaatgtcaccctgccgtgat
ttcgagccgaaaataagtctaaattataattcggggacaggcaatggcattttcggaatc
ggtttctctatttccattcccaacatttcaaggaaaaccgaaaaaggaattccaaggtat
aacgacacagatacttttcttttctcaaacgccgaggatcttgtatctaaaatggtaaag
aaccaagagggaagctgggtcaaggaagaaagacatgtggaagaaaacagagtcggttgg
aaagttctctcatacatacctagaattgagggactgtttgcccaaatagaatactggcag
aattcctgggaatcattttggaaggtaaccaccaaggacaatacaacctccatttatggg
caaagcgaaaatgcaagaatagcagaccctcacgacaatactcgcgtttttaaatggctt
atcgaaaaaacctacgatgccaaaggaaataagatagagtatttttacaaacaggaagat
aatgaaaatgcgccggacaatatctgtgaaaagaaccggacatacgcaacaaataaatat
gtaagcagcattaaatacggcaactatttggatggcaaaggtgaggaagcctgggcattc
gaagtggttttcgattatggacaatacgatatttcagaccaatacttaagccagcccggt
tgcaacccttacattcctgccaggaagtggcctgccaggcaagaccccttttcctcttac
cgaagcgggtttgaaatacgtaccttgcgtttgtgtcggaatattctaatgttccaccat
tttaaaaaagaattgggagaaacaccctgtctagtcaaggccacccaactgacatatagg
gaaccagcgcaacagttacagaatagtaacaacccttttaccaaaatacttcagctttcc
caggtagaattgaagggtttcaaaaggaaagaaaacggcagttatcaatttagatccatg
ccgtcgcttaagcttacctattcatgcctgatgccggcaggtggaaaattcgatactttg
aaagttgggaacagtacggccgtgcccgtaagtacagggcaaatacgttataattttgta
gacctttatggagacggcatcccaggccttttatacagcgacgataaggccacgttgtat
tggaagcccaaaggtaatggtgaatatgagtatcccgaaccagctgcacaatttcccatt
gaaaaggatttaaaaaaaggcgaatacaccttggtgagccttgagggcaatggcaggctt
gacctggtggtgggtaccccgcaaaggggcggcttttatgaaggtaatcccgatggttct
tggcattcttaccgagatttcgcaacctatcccctggatttcactaattcccataaagag
atgatcgatatgaacggagatggtctggcagatctcttgctttacgaggataataccgca
aagatttatccttcattgaagaaaaagggttacggtattcctacaagggccagtctgtca
gaggattatcccacaacaagcaacggatatgcagaagaagtcttaagttatgccgatatg
tttggcgacggcatggcgcaccgagtaagaatccgtaacggcagcgttgagtgctggccc
aatcttgggcacggacgctttggtaaaagggtattgtttgcaaatgcaccgcgttttggg
gatactctggacgcttcacgcctgtttcttgcagacttggacggtaccggtatgacagat
ctcatttatgcttatccagataaagttcaggttttttttaaccagggcggcaacagtttt
agtccccccctatccatacctctgcctgaaacatatagcaatctggaccagctcggtttt
gccgacgtgaaaggtaatgggactgcctgcctggtttttattaaaacaggcgccaatgca
aagcaatactattatgatttttctgaaggaacaaagccctaccttttaaccggcattgat
aacaatctgggggcgttaacaaacataaaatataccagctcggtaaagtattatctgcat
gataaaatggcgggcaagccatggaaaaccaaacttccttttcccgtccaggtggtggaa
aaagtagaaagcatagacaaaatttctggtctaaagctaacaacccaatacaaataccat
gacggcttctacgattctgtggaaagggaattccgaggctttggctttgtggaggaaacg
gatagcgaggatttctttacttatgcgaaacccggtctacttgagaacgttgcattttat
ggcctagaagaggaacaccatgtgccgcctgtcctgacaaaaaggtggtatcatatcgga
gcctgcattgaagaaggggttgtgtcaaaacagtgtgaaaaagaatattaccagcaggat
aaaaggggcttttcaatacccgatagtacctttgatgatgttgtccgacaaggttgcgcc
gaaaccctaaggcaagcttacagggcactgaagggccaggttattcgagaggaggtatat
gcccttgattatattgagggtcggacgggccatccctatacagtaaccgaaacaaatttt
catgtaaggctaatacagccattaataggtgagaatagggcagtgttttctgtttataaa
aaggaaacggttagctttaattatgagcgtaatcctaacgacccgcagatacagcacgaa
tttattcttgctgtggatgactttggtaatgtaaaaaagtcctgtcgtgtgttttatccc
aggcgcgccacccccaaggacgcagtttcggtagttcatccagaacaaaccaaaatcaaa
gcaattgtggatttgcactcttttattaacaacagtttggatttttggttgttaggcatt
tcctacgaaagcaaaacactggaaattggcgctttggatctacagggacaagcttgtttt
agctttacaaaaataaaagaccaggttggccgggccttgcaaaactgtattagaaacgat
gagaagttttctagtgacaaagtacaggccagactgctttcctgggaaagaaattatttc
tggaatgaagcccaggatgcacctctcccccttgggcaaattacagacaaggcattgttg
catcactctgaagaagcggtattctctcaggaactgctaaacacagtatttaatggcaaa
gcgaccattgatatgctggaaaaggaaggagggtacgcctttcaagagggatattggtgg
aacaggggtctggtccagcattatttgaaggacagattcttgttgccgtggaaaacagaa
aattcttacacttctttcccttcatccctgtatgctaaagcagtttatgaatacgaccag
tatagccttgctcctgttaaagcaaccaagtttattactgataaaataacaaatacttcc
agtgctttgctcgactataccatactattgcccgtacaaatcacagatatcaacgataac
gtctcccaggctttttttgatcctttgggtatggttatcgccacatctgtttttggtaca
atgggcggtaaaccagcgggagatagagatttaaaggaatacaaggcaattccccaggtg
gacacgacatttgacgatgtgcttgccaatccccataaatacctgcaggatgccacgacc
tatttctattacgatctgtctgcctggaaaaacaaaggtcagccagctcgttcagttcag
ttgaccagggaaacccacgtcagtgacctagccgctggtgaaaaaagtggtatgcacatc
caaataaactatagtgacggatttggcagggaaattgaaaagaaacttaaggctgatgca
ggggaagctgttttaagggataatgcaggaaaacccgtttacgatgcagcgggcaaaatt
gttaaggattttgcccaggatcgctggattgtatctggcagaaccgtttacaacaacaaa
gccaagcctataaagcagtttattccctatttttcagccacgccagattatgaactgcag
aaggacatcgatcccattttgcccaagcccacaataatttattacgatcctttgcttagg
gtggtaaaaacagtgaatcccaaaggatttttttccaaagtagaatttacgccttgggag
gaaaagcattttgatgaaaatgatacggtaagagacagtgtttattttaaaaattttaag
gaaacttattccaaagacccatcacaggagcaaagggatgaaaaggatgctctggataag
gcttcccgttcttataatacgccggatacaaaggttttggacaacacaggtcagactttc
ctggaaattcgcaataacctgggagagataacgaaagatatccttcaagatatcgtcaaa
gggacagaagtaaattgccaagagttgtgggatgaacttaaatcaaaaggatatattgaa
actggtgacccaccttcggcaatgggttgggtgtcgggcaaatttcgtccctattttaag
gggtttatgttggggctagatggcaggtacaaacagtttgaagaaaaaattataaatttg
ttgaaagaaaactgtcttaccacttatcatgaattggatattcaaggaaatgttctcttc
tctgttgatccgcgactttattactccaacctgaaggatcatacggactattacaacttc
aaatatgtttatgacatgcaaaaaaaacctctctccgtagacagcgccgacgcgggtcta
aagttaagtttgtccaacatctttggtaatacagttcattcctgggatagccgcggtttt
catacaagaaaaatgtacgacagtctgcaacgttgtgttcagattggcgttgaaggtaac
gacggacgaggtcttgttttgcatcaggcggttgaaaagtttgtttatggagaattttac
gaagagaaagaagaagcttcaaaggataagaatttgcggggtcaagtttataaacatttt
gaccaggccggcgttgtaacttgcaatctctataacctgaaaggtaaggcagtgcaaacg
gacaggcagtttctggccgattataaaaaggaagctaactgggataatgtgaataaatcc
agtctggcagatgagctattcagcattggctgctcctatgatgcccttgaaagagttatt
tcagaaacagctcctgatggcagcatttacacgcatatttacaatcaagctggtttgctc
cggaaagttgttgtggctttcaaggatggcagcgaagaggagtttataaaggacatccaa
tacaatgccaatggccagcgtcttaaaataatttatgggaacggtgtgacaacagaatat
tcttatacagatccggccttgcgtttaaccgatattttatcattgaaaccagatagtaat
aacacaaaggatttcaagggttgtctcctgcaaaaaatccattatacctacgatccggtg
ggcaatgttaccagactgcgggataactcataccccactgttttttacaatcagcaaaaa
gtggagcccttgagcgattattcatacaaccctttataccagttggtcagtgccacaggc
cgccagcatcccggtatttttgacgggagtcacagagatgggtttaaacaaagcaaattt
atacccatcaagtcttccaaccccaatgatggtacaagtttggagaactaccgccaggac
tatcagtatgatgaggcaggaaacctgacaaacataaggcatatttcgtcatcgacctca
tggacaaggcagcttgacatatcgaagggtaccaaccgtactgttcaaattgcttcgtta
aacggtgcaaagaatttcttcaaaacggcatacgacccctgcggcaacatgctaaatctg
gaaaacctggccagtataaactggagctatagaaataacctgtctagagtggacgttatt
ttaagggaaaacaacagttcagacagcgaatattttatttatgacagcagtggacagcgg
gttagaaaggtgagcgaacgcaaatgcggctccctcagggaaatagaggagaagctttat
cttggtaactttgaaattaaacgcattaaaaagaaatcggatcatttggaatcgcaaata
ctggacagacagtcccttcatattatggatggcaaaagccgcatagccataaccgacatt
tggctcaaggatgacttaaatcgggagaccgaaaaaaccatggagcgcaagttccgctat
caattgaataacaacttgggttcagcttgcctggaagttgatgaaaaggtaaacataata
agctgcgaggagtactttccctacggcggcacttctttcattgccggaagggataagagg
gaagtcaaactgaaggagtaccgttactgcggcaaagaaagggacgactccacaggcttt
tattattacggtgcccgctactacctgccctggttgggcaggtggatcaatcccgaccca
gctggaacggtggatgggcttaacctgtattcctttgtaaagggaaatcctgttaacttt
atcgacacaagcggtaaggtaggcggttcctggttgcacttgctctatggaggtctcacg
gcccttgcggttggactgattggtggggccgccgtaggtacgggggactatgcctccccg
gttgtggccgccctggcaggcttggccggtatgctttttaacaaagataaaagtgcatta
ggtgctctggccattgctggggcaggtgccataggttcagccgttggcggctatgttggc
agggggacgatgtctaaattaaaagaaaaagactggcagaccacatctgtggccagaacg
ggcctagtggcctccggcttaaccgggggaacaatcggttccctgggagtattggctgta
caggcagtcaccaggcagtttaatacccataatatcctaatgggagccattgcaggtttt
ggcgggggaattctggcttcgggtgcccaatttggtttatttaagcctggcgatgcaaaa
gtgccaaccatgcctgtacgagcagaattaaaagacctattaccttatcaaacccgagct
tttgataggcattacctggaacttaatcctaatcctgaagaattaattaccaatcttaaa
ccaaaacactttacagttattgacgaggaaacacagcaaagggtcaagtgcgacttagta
gcagtccatggatatccgcgattctcctttgtccaatcggtgcatggcgattacaatcag
tatattgataaggaaaaactggtccaacttttgcagcaggctggttttccccatcaggat
tcaaccacaggaaaaaatatacccattaaacttgctacctgctttggtggtttctgggag
agctggttcagtacagcgcagttggttgctgacaagctggggacggaggtgtatgcccac
cgctggccggtcactgttgcccaacagagtccatggaaaaaatttactcctaattaa
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integrated database retrieval system