Desulforamulus reducens: Dred_1599
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Entry
Dred_1599 CDS
T00494
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
drm
Desulforamulus reducens
Pathway
drm03030
DNA replication
drm03410
Base excision repair
drm03420
Nucleotide excision repair
drm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dred_1599
03410 Base excision repair
Dred_1599
03420 Nucleotide excision repair
Dred_1599
03440 Homologous recombination
Dred_1599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drm03032
]
Dred_1599
03400 DNA repair and recombination proteins [BR:
drm03400
]
Dred_1599
Enzymes [BR:
drm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dred_1599
DNA replication proteins [BR:
drm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dred_1599
DNA repair and recombination proteins [BR:
drm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Dred_1599
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dred_1599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABO50127
UniProt:
A4J4X4
LinkDB
All DBs
Position
complement(1737914..1740565)
Genome browser
AA seq
883 aa
AA seq
DB search
MSLDTIIIIDGNSLIHRAFHAIPLLSNSKGVITNAVYGFTNMVLKVIKEQEPGLVAVAFD
KGKTTFRNQEYAAYKGTRKATPDELRPQFILARDILGAMRIPFFELDGFEADDLIGTIAC
QAEATGLNVLILTGDRDALQLVSPKTKVMLTRKGITEIDLFDEGKVWDKYGVTPSQVVDL
KGLQGDTSDNIPGVAGIGEKTASVLIKEYGSVEEILKNIDKLSPRHQKLLRGNEEIALLS
KKLATIIRDVPMELDLSECSWHGPDNQKLLEIAKELEFKTLIKQLTSGQKFIKQSQDSGT
SADLPPLETYQVGYLNVTDQDALDELLIEVSRQGKVAIYLEGLRNQGIDTAYLAMEDHDI
YRLAIQNKDSDSDPCLTVLKAICECESVKKYFHDAKQALWMLHHHSIELKALAADTMVSA
YLLNPTASNYDINDVALEHLGMVLPAEGETAMASRAEAIRRLAQKLFEKLAERQEDRLLT
QVELPLVRILSEMEIAGVAVDKQGLQDMSVELQTVTETLTTKIHELAGENFNINSPKQLG
PILFEKLKLPVLKKTKTGYSTDAEVLEKLAEEHEIVALILEYRQMAKLKSTYTDGLAALV
DPQTGRLHSTFHQTVTATGRLSSAEPNLQNIPIRLETGRKIRKVFIPRQRGNLILTADYS
QIELRVLAHMSQDESFLDAFRQGQDIHTRTASEVFGVPMDQVTSEMRSRAKAVNFGIVYG
ISDFGLARDLKVSRKEAQGYIDHYFARCPGVRQYIDRVIKEAKETGYVNTLLNRRRYLPE
LFSKNFNIRNFGERAAMNTPIQGTAADIIKLAMVKISQQLKEQNLSSQMVLQVHDELIFD
APENEIESLIMLVRQSMENALQLDVPLVVDIKLGPNWYEAKPI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
ttgtccctggataccatcattattatcgacggcaacagcctaattcatagagcttttcat
gccatccccctgctttccaacagtaaaggggttattaccaacgctgtatatggtttcact
aatatggttttaaaggttatcaaagagcaggagccgggtcttgttgctgttgcctttgat
aaaggcaaaaccacgttccgaaaccaggaatatgccgcatataaaggtacccgtaaagct
acccccgatgaactgcgccctcaatttatcctggccagggatatcttgggagcgatgcga
atacccttctttgaattggatggctttgaggccgatgatttaatcggtaccattgcttgc
caggccgaggccactggactcaacgtgttaattcttaccggtgatagggacgctttgcaa
ctggtgtctcctaaaaccaaggttatgctgacccgtaaagggatcacagaaattgactta
tttgatgaaggtaaggtctgggacaagtatggtgttactccaagtcaggttgtggattta
aaaggtctgcaaggggacacctcggataatatccccggcgttgccggtatcggagaaaaa
accgccagtgtattaattaaagaatacggatctgtggaagaaatcttaaaaaacattgat
aagctctcccccaggcaccagaaactcttacgaggaaatgaagagattgcacttctttca
aagaaactggccactattatccgggacgtccccatggaactggatttatctgaatgttcc
tggcacggacccgataaccaaaagcttctggaaatagccaaggagcttgaatttaaaacc
ctgattaagcaacttacctccggtcaaaaatttataaaacaaagccaagacagtggaaca
tctgctgatttgccacctttagaaacctatcaagtgggttatctaaatgtaacggatcaa
gatgcccttgatgaacttctcattgaggttagtcgccagggaaaagttgccatttatctg
gaaggtttgagaaatcaagggattgacactgcctatttggcaatggaggatcacgatata
tacagattggctatccaaaacaaagacagtgactcggacccctgcctgactgtgctgaag
gccatttgtgaatgtgagagtgtcaaaaaatattttcacgatgccaagcaggccctgtgg
atgttgcaccaccatagcattgaactgaaggcattggccgccgacaccatggtatcggcc
tacctgctaaatcctacggcctccaactacgatattaatgatgtggccttagagcatctg
ggcatggtattgcctgcggagggcgagacggcaatggccagcagagctgaggctatccgc
cggttggcccagaaactatttgaaaagttggctgagcgtcaggaagacagattgctaaca
caggtggagttgcctctggtacgcattctgtctgagatggaaattgccggcgtagccgtt
gataagcagggtttacaggacatgtctgtggaacttcaaactgtaacagaaaccctgacg
accaaaatccacgaactggccggtgagaactttaacattaattcccccaaacaattgggg
cccattctctttgagaagcttaagctacctgtacttaaaaaaaccaaaacggggtattcc
accgacgcagaggttctggagaaactggccgaggagcacgagatagtcgccttaattctg
gaatatcggcaaatggccaaattaaaatccacctataccgatggtcttgcggccctggtg
gaccctcaaacagggcggctgcattcaacctttcaccaaacggttaccgccactggacgg
ttatcaagtgcagaaccaaatttacaaaacattcccatccggttggaaaccggcaggaaa
attcgcaaggtgtttattccccgtcaaaggggtaatctaatcctgacagcggattattct
caaatcgaattgagagtgcttgcccatatgtcccaagacgaaagcttcttggatgcattt
cggcagggtcaagatatccatacccgaactgcttcggaggtttttggcgtacccatggat
caggtgacctcggaaatgcgaagtcgggccaaggctgtcaacttcggtatcgtttatggc
atcagtgactttggactagctcgggatttaaaggtgtcacgcaaagaggcccagggttat
atcgatcattactttgcacgctgcccgggggttcggcaatatattgacagggttatcaaa
gaggcaaaagaaaccggctatgttaacacattgttaaaccgccgccgttacctgccggaa
ttattcagcaaaaacttcaatattcgtaacttcggggaacgagctgccatgaatactcct
atacagggcactgctgcggatatcataaaactggccatggttaaaatcagccagcagctc
aaagagcaaaatctttcttctcaaatggtcctacaagttcatgacgaattaatttttgat
gcaccggaaaacgaaatcgagtcattgataatgctggttcgccaaagtatggaaaacgca
ttacaattagacgtaccactagtggtggacattaagcttggtcccaattggtacgaagct
aagcccatttaa
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