Desulforamulus reducens: Dred_1954
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Entry
Dred_1954 CDS
T00494
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
drm
Desulforamulus reducens
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drm03016
]
Dred_1954
Enzymes [BR:
drm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dred_1954
Transfer RNA biogenesis [BR:
drm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dred_1954
Prokaryotic type
Dred_1954
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABO50472
UniProt:
A4J5W9
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All DBs
Position
complement(2144641..2145573)
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AA seq
310 aa
AA seq
DB search
MDGVINILKPPGMTSHDVVFFVRRVTGVKKCGHTGTLDPGASGVLPVCVGKATRLARFVT
DGDKTYRAEITLGIETSSQDAFGNVISRIDASAIKLDDFSSELRKFQGEIKQTPPMASAI
KVKGKKLYELEREGIIVDVPTRTVTIYQVNIVDSWDWGTPNPRVLFDVACSKGTYVRTLC
SDIGKELGCGAYMSFLLRSRVAAFGLHNAYTLEEIAALADKSQLESAVIPMAKAVQHLPI
VEIHPSAQKSVCSGATLYPAGVRVGLEYLKPEGLVQVQLNHELLGIYKPVLDVNDFGERI
ILRPEVVFAS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtggatggggtcatcaatatcttaaagcctccgggaatgacatcccacgatgttgtattc
tttgtaagacgggttactggggtgaagaaatgtgggcatactggtacccttgaccctgga
gcatcgggtgttctcccagtatgtgtaggcaaagctacacgactagctaggtttgttaca
gatggagacaagacttatagggctgaaataactctgggaattgaaacatccagtcaggat
gcctttggcaatgttattagccgcatcgatgcatcggccataaaattggatgacttttcc
agtgaattacgcaaattccagggagagattaaacaaaccccgcctatggcctcagccatt
aaggttaagggcaaaaaactctatgaacttgaacgggaaggtataatagtagatgttcct
actagaacggttaccatatatcaggtgaatattgtagacagttgggattggggaacccca
aaccccagggtattgtttgatgtggcttgttcaaaggggacatatgtgcgtaccctgtgt
tcggatatcggcaaggaactgggttgtggcgcctatatgtcctttttgttacgttcccgg
gtagccgcctttggcttgcacaatgcttatacattggaggaaattgcagctttagctgac
aaaagccaactagagagtgcagtaatcccgatggctaaggctgttcagcatttacccata
gttgaaattcatccttctgcgcaaaaatcagtatgctccggagcaaccctgtatccggcg
ggtgtaagagtaggattagaatacctaaagcccgaaggtcttgttcaagttcaactaaat
cacgaattgttaggtatttataagcccgttttagatgtaaacgattttggggaacgcata
attctaagacccgaagtggtttttgcttcataa
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