Desulforamulus reducens: Dred_1955
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Entry
Dred_1955 CDS
T00494
Name
(GenBank) phosphoesterase, RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
drm
Desulforamulus reducens
Pathway
drm00920
Sulfur metabolism
drm01100
Metabolic pathways
drm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Dred_1955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drm03400
]
Dred_1955
Enzymes [BR:
drm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Dred_1955
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Dred_1955
DNA repair and recombination proteins [BR:
drm03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Dred_1955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
BofA
Motif
Other DBs
NCBI-ProteinID:
ABO50473
UniProt:
A4J5X0
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All DBs
Position
complement(2145575..2146546)
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AA seq
323 aa
AA seq
DB search
MNNLRTVADVLEKSSRPLLCGHIMPDGDSLGSVLALGMGLQSVGKEVTIVSSDPLPDLYR
FLPGIDEIVVGSVPDRKYDLLVVVDCSVPERLGSTITPTVDSGLPVVVIDHHVNDQPFGH
HNYVRSSAAATGEIIMELLELLGVSINLDIAINLYTAIVTDTGSFRFENTTPETHSKAAE
LVKFGVPVSRLSNLIFGEQPLKSIRLLEAALNSLEVSDCGRIAWISIDRDKIDALGAEDQ
HIEGLISYPRKIKGVELAISFRELDKQKVKVSFRSKYTVDVNFLAKKFGGGGHVRASGCT
IQGTLQEVKEVVLKEAQEIFRGC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttgaggacagtggcagatgtgctggagaagtcaagtagacccttgctgtgt
ggtcatattatgccagatggtgatagccttggctctgtcctagcgttaggtatggggtta
caatctgtaggtaaagaggtaactatagttagttcagacccactgccggacttatatcga
tttcttcccgggatcgatgagattgttgtgggcagtgtacctgatcgcaaatatgattta
cttgtggtggtagactgttcggtgccggagcgccttggttctaccatcactcccacagtg
gactcaggtttgccagtggtagttatcgatcaccatgttaatgatcagccctttggacac
cataactacgtaagatcaagtgcagcagccactggggaaataattatggaactgctggag
ttattaggtgtttccatcaatttggatatagccatcaatctttatacagccattgttaca
gatactggttcatttcgttttgaaaacaccactccagaaacccacagtaaggcagcagaa
ctggtgaagtttggagttccagtttcccgtttatccaatctgatttttggggaacagcct
ctgaaatcgatcagattattggaagctgccttaaatagccttgaagtcagtgattgtggt
cgcattgcttggataagtattgaccgtgataaaattgatgcgttgggtgctgaggatcag
catatagaaggtctaataagttacccccgtaaaattaagggtgttgagttagctatttcc
tttagggaattggataagcaaaaggtaaaggttagttttcggtctaaatatacggtggat
gttaactttttagctaaaaaatttggtggcggaggacatgttcgagcctcagggtgtacc
attcaaggtacacttcaggaagttaaggaagtcgttctcaaggaagcccaagaaatattc
cgggggtgttaa
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