Desulforamulus reducens: Dred_2319
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Entry
Dred_2319 CDS
T00494
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
drm
Desulforamulus reducens
Pathway
drm03030
DNA replication
drm03430
Mismatch repair
drm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dred_2319
03430 Mismatch repair
Dred_2319
03440 Homologous recombination
Dred_2319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drm03032
]
Dred_2319
03400 DNA repair and recombination proteins [BR:
drm03400
]
Dred_2319
Enzymes [BR:
drm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dred_2319
DNA replication proteins [BR:
drm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dred_2319
DNA repair and recombination proteins [BR:
drm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dred_2319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
ABO50829
UniProt:
A4J6X6
LinkDB
All DBs
Position
complement(2535584..2539261)
Genome browser
AA seq
1225 aa
AA seq
DB search
MLEGKVVPENQFVHLHVHTEYSLLDGASRINQMAKQAKESGMNSLAITDHGCMFGVVDFY
KVCHKEGVKPILGCEVYVAPRRRIDRTPKLDDQPNHLVLLAENQEGYKNLLKLVSLGYTE
GFYYKPRVDKELLQRYHKGLIALSACLAGEVADKILGSQPEKARQAAREYVDIFGKDNFF
LELQDHGYQEQRTVNRELLKIAKELQIPLVATNDVHYLKREHAEIQDVLLCIQTGKSINT
PGRMKFESQEMYLKSPHEMNLLFAEIPDALSNTLRIAERCQVDLEFGKYHLPYFTVPEES
SPAQYLREKCLEGAIKRYGHCSGPVQERLEYELNVIGKMGYDEYFLIVWDFIHYARQKGI
AVGPGRGSAAGSIVSYALGITNIDPLKYGLLFERFLNPERISMPDIDIDFDYERRGEVIE
YIVQKYGTDRVAQIITFGTMAARAAIRDVGRALDMPYGDVDRVAKLVPTELNITIAKALT
SSPDLKAAYDQDPEVKRLVDTAAALEGMPRHASTHAAGVVISREPLVEYLPLSKTSDGLV
TTQFPMTTVEELGLLKMDLLGLRNLTVISETVNLIEQIKETKLDINTIPLDDQATFDMLT
RGEGVGVFQLESSGMRNILRELKPNAFEDIVALVALYRPGPLGSGMVEDFIQRKHGQNKV
DYFHPDLEPILKETYGVILYQEQVMMIARIMAGYSLGQADALRKAMGKKIAKIMGMHRDW
FINGSTLDDKGKPLKNPIPGAVARGYSRQLAEKMFDLMEYFAGYGFNKSHSAAYALVSYQ
TAYLKANYPVEYMAALLTSVRDNTDKVVLYIDECRRMGIQVLPPDINLSRENFTAANGAI
RFGMAAVKNVGWGAVQEIIQIREKKGPFTGFYDLCGRLDTRIANRRVLESLIKAGALDAF
GYRSQLLAGLDTGLEHAARSQRDREQGQVSLFDLMSESPAQVMELKLPHVPRLTSRQQLE
MEKEALGLYISGHPLSEFGWLLDQLEVQRVVHLAELPDGNNLLVAGIISTIKRITSRKGD
PMAFLTLEDLTGSCEVVVFPQVYRRHFSLLDLKVPLLLKGKLNNNGEETKILAEEIQPLE
NVTCELWLRLSENVISKELEERLISHPGSSPVFLFYPEDRHKVQLEKEVSLSLNLKRSLT
SLLGEDNILLRFNQPLKAPVAAARDTSRVKEVPGRYTVAKTVKASQPEQPKINPLPRSGL
VKPVTISSGPFDPDTYPVPESLLDL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
ttgctggaggggaaagtagtgccggagaatcaatttgtccacttacacgtacatactgaa
tacagcctgctggatggagcaagccgtattaatcaaatggctaagcaggccaaagaaagt
ggcatgaattcccttgccattaccgatcacggctgcatgtttggggtggtagacttttac
aaagtctgccataaggaaggggtaaaacccatactaggctgcgaagtctatgtggcaccc
cgccgcaggattgaccggacacccaaactggacgatcaaccgaatcatctggtactgctg
gctgaaaaccaggaagggtacaaaaaccttctaaaattggtgtcccttggttataccgag
ggtttttattataagcccagggtggataaggaactgctacagcgctatcacaaaggactt
attgccctcagtgcctgtttggcaggggaggttgccgataaaatcttaggcagccaaccg
gaaaaggctcgccaggccgcaagagagtatgttgatatttttggtaaagacaactttttt
ttagaactgcaggaccacggttatcaagaacagcgtacagttaaccgggaattactaaaa
attgccaaagaattacaaatcccgctggtggcaaccaacgatgttcattacctgaaacgg
gaacatgcagagatacaggatgtgttgctttgtattcaaaccggtaaaagcattaacaca
ccgggaagaatgaaattcgaaagccaggaaatgtacttgaaaagcccccatgagatgaac
cttctctttgctgagatacccgatgccctgagcaacacactgcgtattgccgagcggtgt
caggtggatttagaatttggcaagtaccacttaccttattttacagtacccgaagaatcc
agcccagcccaatatctacgggaaaaatgcctggaaggtgccataaaacgatatggacat
tgctctggacctgttcaggaacgactggaatacgaactaaatgttattggcaaaatgggg
tacgatgagtattttctaattgtatgggactttatccattatgctcggcagaagggtatt
gctgttgggcccgggcggggttctgctgccgggagcattgtttcttacgccctgggtatt
accaatattgatcccctgaaatatggcctgttgtttgaacggttcttaaatccagagcgt
atctccatgccggatattgacatcgactttgactacgagcgccggggagaagtcattgaa
tatattgtgcaaaaatatggtacggaccgggtagcccagatcattacctttggaaccatg
gctgcaagggcagccattcgggatgtaggccgagctctggatatgccctatggtgatgtg
gatcgggtagcaaaattagtgccaacggagcttaatataaccattgccaaagcacttaca
agttcaccggatttaaaggcagcttacgaccaagaccccgaagttaaacggctggttgat
actgccgctgcattagagggaatgccaagacatgcttccacccatgctgccggggtggta
atatcccgggagcctctggtggaatacctgcccttgagcaaaacctcagatggtttggtg
accacccaatttcccatgaccacagtggaggaactgggtctattgaagatggatttgctg
gggctacgcaacttaactgtaatttcagaaaccgtcaatttaattgagcaaataaaagaa
actaaactagatattaatacgattcccttagatgatcaagcaacctttgatatgcttacc
cggggtgaaggagttggcgtattccagttagaaagtagcggcatgcgcaacattctaagg
gaactaaaacccaatgcctttgaggacattgtagccttggttgctctttaccgcccgggt
cccctaggcagcggcatggtggaggattttatccagcgcaaacacgggcaaaacaaggtg
gattattttcacccagatctggaaccaattctgaaggaaacctatggagttattctatac
caggaacaggttatgatgattgccaggatcatggccggttactcccttgggcaggccgat
gcattacgcaaggccatgggtaaaaagattgctaaaattatgggcatgcatcgggactgg
tttattaacggcagcacccttgacgataagggaaagcccctgaaaaaccccattcctgga
gctgtggctaggggctatagtaggcaactggcagaaaagatgtttgatctgatggaatac
tttgcgggttatggttttaataaatcgcactctgctgcttacgccttagtttcctaccaa
actgcctatttgaaagccaattacccggttgagtacatggcggccctgcttacctcggta
cgggacaatacagataaagtggtcctgtatatagatgaatgccgtcgtatgggaatacag
gtgttgccaccggatattaacttgagccgggaaaactttacagctgccaatggtgccatt
cgttttggtatggcagcggtgaaaaacgttggctggggtgctgttcaagagataatacaa
attcgggaaaagaaaggtccatttactggattctatgatctctgtggtcgtttggacacc
cgaatagccaaccgaagggtgttggaaagcttgattaaggccggggcattggatgccttt
ggctaccgatcccagcttcttgctggtttggacactggccttgagcatgctgcccgttca
cagcgggaccgtgagcaaggtcaggtaagcttatttgacctgatgtctgaaagtccggcc
caggtgatggaacttaagctgcctcatgttcctaggttaacgtcacgacaacaactggaa
atggaaaaggaagcactaggattgtatatttccgggcatccactgtcagaattcggttgg
ctgctggatcaactggaggttcagcgggtggtgcatttggcagagctccccgacggtaat
aacctgttggtggcgggaatcatttctaccatcaaacggataacctcccgcaagggagac
ccaatggcctttttgaccctggaagatttgacgggaagttgtgaagttgttgtctttccg
caagtataccgtcgtcattttagtctactggatttaaaagtcccacttttattaaaggga
aaattgaacaacaacggtgaagagactaaaatactggcggaggaaatccagccgctggag
aatgttacctgcgaactgtggttaaggttatcagagaatgtcatatcaaaagaactggaa
gaacgcctgatatcgcacccgggaagctcgccagtatttctcttttacccagaagacagg
cataaagtgcaattggaaaaagaggtttccttaagcctaaatttaaaacgatcccttaca
agccttctgggggaagacaatatactattgcgttttaaccagccattgaaagcaccagtg
gctgctgcccgggatacctcccgtgtcaaagaagttcctggtaggtataccgtagctaaa
accgtgaaagcatcgcaaccagaacagcctaagattaaccctttgccccgcagtgggttg
gtgaagccggtaacgatctccagcgggccctttgatccggatacttacccggtgccggaa
agtttgctggatctatag
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