Desulforamulus reducens: Dred_2388
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Entry
Dred_2388 CDS
T00494
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
drm
Desulforamulus reducens
Pathway
drm02020
Two-component system
drm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dred_2388
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dred_2388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drm03021
]
Dred_2388
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
drm02035
]
Dred_2388
Transcription machinery [BR:
drm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dred_2388
Bacterial motility proteins [BR:
drm02035
]
Flagellar system
Flagellar assembly proteins
Stator
Dred_2388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
GerE
UPF0122
Sigma70_ECF
Clr5
HTH_Tnp_4
IF2_N
MarR_2
SinI
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ABO50898
UniProt:
A4J745
LinkDB
All DBs
Position
complement(2610194..2610949)
Genome browser
AA seq
251 aa
AA seq
DB search
MSIDLLWEKYITLRDPEARQKIILLHLPLVKHLAGRVAVKLPSFILREDLESYGVIGLME
ALDKYDPAMGHSFDSYAYHRIRGAMLDEVRRQNWLPRTAWQKNQLLKNTRERLEREQGEV
ITNEVLAKEMGIPVEEVRQLIFNANKMYIQSLDEEVAGHDGSQMSKLELLEDTNSPDPLS
IVEEKESKRLLAEAIETLSEREKLILALYYSEGLTLKEIGQVLEVSESRVCQLHSQVMKR
LKKTLESMLNS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgatctcttatgggaaaaatacataacgcttcgtgatccggaagccaggcag
aaaataatcctgcttcatttacctctggttaaacatctggcaggaagagttgcggtaaaa
ttaccttccttcatcctaagagaggatctggaaagttacggtgtgatcgggttaatggag
gcccttgataagtacgatccggccatggggcacagcttcgattcctatgcctaccaccgt
attaggggagccatgttggatgaagtgcgacgtcaaaattggctgcccagaacagcctgg
caaaagaatcaacttttaaaaaacacccgggagcgtttagaaagggaacagggtgaagta
attactaacgaggtattggccaaagagatgggaatacctgttgaagaggttcgtcaacta
atctttaatgccaataaaatgtatatccagtccttggatgaagaggtagccggtcatgat
ggcagccaaatgagcaagctggaattattggaggataccaatagcccagatcccttaagc
atcgtagaagaaaaggaaagcaaaagactgctggcggaggccatagagacactgtctgaa
cgggagaagctaatcttagctctctactacagtgaggggctaacccttaaggagatagga
caggtattagaagtttccgaatccagagtttgtcaacttcattcccaggtgatgaaaaga
ttaaagaaaaccctggaaagtatgttaaatagttag
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