Desulforamulus reducens: Dred_2462
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Entry
Dred_2462 CDS
T00494
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
drm
Desulforamulus reducens
Pathway
drm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dred_2462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drm03021
]
Dred_2462
Transcription machinery [BR:
drm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dred_2462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
DUF722
Exonuc_VII_L
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABO50972
UniProt:
A4J7B9
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All DBs
Position
complement(2679938..2681041)
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AA seq
367 aa
AA seq
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MRDEAKVEQIKELIEKGKKRGVLTYNEIMDTLQGTELSPDQIDDIYEKISAMGIEVVPLA
SDLEPLEVDDSVENSTEEEVEVEVDLSIPEGIGIDDPVRMYLKEIGRVPLLSPEEEVDLA
KRMEQGEEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGY
KFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPSPEEIAK
EMDISGEKVREILKIAQEPVSLETPIGEEEDSHLGDFIEDADARAPAEEASFTLLREQLD
EVLKTLTDREQKVLRLRFGLDDGRARTLEEVGQKFGVTRERIRQIEAKTLRKLRHPSRSK
KLKDYLD
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgagggacgaagcgaaagtagaacaaattaaagagttaatcgaaaaaggcaaaaaacgt
ggggtactaacatataacgaaattatggataccctgcagggcaccgagttgtcgccagat
caaattgacgacatttatgaaaagatttctgctatgggtattgaagttgtccccttagcc
agtgatttggagcctctggaagtagatgactcagtagaaaattcaaccgaggaagaggtt
gaggttgaagttgatttaagtattcccgagggtattggtatcgatgaccccgttagaatg
tacctaaaggaaattggccgggttcccctactatcgcccgaagaagaagtagacttggct
aaaaggatggagcaaggagaagaagaagctaaacgacgtcttgcggaggctaatttacga
ctggttgttagtattgccaagcgctacgtgggcaggggtatgcttttcttggatttaatc
caggaaggaaatttaggtcttattaaagcggtagaaaaatttgattatcgaaaaggttat
aaattcagtacctatgccacctggtggattcggcaggccattacccgggccattgcagat
caggcccgtaccatccgtatccctgtacatatggtggaaaccataaataaattgattcgg
gtttctcgccaactgctacaggaactgggaagggaaccctcccctgaagaaattgccaaa
gagatggatatttctggtgaaaaagttcgagaaatcttgaaaattgctcaggagcctgta
tcactggaaacgcccattggtgaagaagaagattcacacctgggtgattttattgaagat
gcagatgccagggcaccagcagaagaagcttcctttacacttttgcgcgaacaattagat
gaagttcttaaaaccttaacggatcgtgagcaaaaggttcttcgcctgcgttttggtttg
gacgatggtcgtgctagaacattggaagaagtgggacaaaaatttggcgttactagagaa
cgtattcgtcaaattgaagcaaagacgttacggaaactgcgacatccaagccgtagtaag
aaattaaaggattacctggattaa
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