Desulforamulus reducens: Dred_3054
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Entry
Dred_3054 CDS
T00494
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
drm
Desulforamulus reducens
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drm03019
]
Dred_3054
Messenger RNA biogenesis [BR:
drm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dred_3054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_33
Zeta_toxin
SKI
AAA_22
DUF2380
AAA_16
DUF2281
Motif
Other DBs
NCBI-ProteinID:
ABO51556
UniProt:
A4J903
LinkDB
All DBs
Position
complement(3315946..3316842)
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AA seq
298 aa
AA seq
DB search
MSDSEGGVEVSSPRLLIVTGMSGAGKTQAVQSLEDLGYFCVDNLPPALIPKFAELVSQSN
GKVEKVALVVDIRGGAFFHQAIEVLHDLGEQGYRFEVLFLEASDETLVRRYKESRRRHPL
DNHGEVLKVIQEERELLREIRGRATKVIDTSNVSNNQLKEQIITQYGGDKENSNRLLITV
ISFGYKYGIPMDSDLVLDVRFLPNPYYIPELRCLTGNDEPVQQHVMSQDVTKEFMEKLID
FVQFLVPHYQREGKATLMIAIGCTGGMHRSVTLTNKLGEVLSEKGYRVNVRHRDIMRV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcagaggggggtgttgaagtgtccagtccacggctattaattgttaccggc
atgtccggagcgggtaaaacccaagctgtgcaaagtttggaggacctgggctacttctgt
gtggataatttacctccggccctgattcccaaatttgccgaactggtttcccagtccaat
ggcaaagtggagaaagttgccctggtggtggatattcgcggtggggcgttctttcaccag
gccatagaagtattgcatgacctcggtgaacagggataccggtttgaagtcttattctta
gaagcatcggatgaaacactggtacgtcgctataaagaatcccggcgccgccacccgctg
gataaccacggcgaggtattaaaggttatccaggaggagcgggaactgctgcgggaaatc
cggggcagagccaccaaagtcattgatacctccaacgtttccaacaaccagttaaaggaa
caaatcatcacccagtacggtggtgacaaggaaaactccaacaggctgctcattaccgtt
atttcctttggctacaaatacggtattcccatggattccgacttggtgctggatgtacgg
tttctgcccaatccctactatataccggaactgcgctgcctcacgggcaatgatgaaccc
gtgcagcagcatgtcatgtcccaggacgtaaccaaagaatttatggaaaaactaattgat
ttcgtccagtttctggtgccccactatcaaagggagggcaaggctacactgatgattgcc
attggctgtaccggtggtatgcatcggtccgtaaccctcaccaataagctgggtgaagta
ttaagtgaaaagggctaccgagttaatgtaaggcaccgagatatcatgcgagtttag
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