Desulforamulus reducens: Dred_3174
Help
Entry
Dred_3174 CDS
T00494
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
drm
Desulforamulus reducens
Pathway
drm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dred_3174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drm03021
]
Dred_3174
03019 Messenger RNA biogenesis [BR:
drm03019
]
Dred_3174
Transcription machinery [BR:
drm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dred_3174
Messenger RNA biogenesis [BR:
drm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dred_3174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
AAA
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ABO51676
UniProt:
A4J9C3
LinkDB
All DBs
Position
complement(3453766..3455118)
Genome browser
AA seq
450 aa
AA seq
DB search
MAENDRPVMTQAQLEAKTMQELYGIARELEIPGYYKFRKKEIIFEISKLQSKQSGVSYAG
GVLEILPDGYGFLRPSTYVPSNDDIYVSNSQIRRFDLRTGDMVYGQVRKPKDNERYYGLL
RVEQVNGARPELAAERMHFAGLTPLYPQDRIRLQTTPDKISTRIIDLISPLGKGQRGLIV
APPKAGKTILIKEIANSITANHPEIELFILLIDERPEEVTDIERSVKAEVVSSTFDEPPE
NHVKASDMVLERAKRLVESGRDVVILLDSITRLARAHNLVIPPSGRTLSGGVDPAALHKP
KRFFGAARNMEEGGSLTILATALIETGSRMDDVIFEEFKGTGNMELILDRKLADRRLFPA
IDIQRSGTRREDLLLSKEELDYVWSLRKVIAGMSSIEALESLLDRLKNTRANDEILHDFK
PKTRVQPLNPNLDVSQPPGQKRPYRRKIQE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaaaatgatagacctgtcatgacacaggctcaactggaagcaaagaccatgcag
gaattgtatggtattgcccgtgaattagagattccaggttattataaatttcgcaaaaaa
gaaattatctttgagatatcgaaattacaatcgaagcaaagcggtgtttcctatgccgga
ggggtactggaaatcctccctgacggatatggctttttaagaccatcaacctatgtacct
agcaacgacgatatttatgtatctaactcccagatacgacgatttgatctaagaacaggg
gatatggtctatggccaggtaaggaagccaaaggataacgagcggtactacggtctgcta
agagtagagcaggttaatggtgcaagacccgaacttgcggcggagcgtatgcactttgcc
ggacttacacccctttacccccaggatcgcatccgattacaaaccacccctgataagatt
tcaactcgcatcatagacctcatttcacccttgggaaaaggacagagaggcttgattgtg
gctcccccaaaggcaggtaaaaccattttaattaaagaaattgccaatagtattacggct
aatcaccctgagattgaattgtttattctactaatcgatgagaggcctgaggaagtaacg
gatattgaacgatccgttaaagcggaagtagttagttccacctttgatgaaccaccggaa
aaccatgtaaaggcctcggatatggttttggagcgggctaaacggctggttgagagcggt
cgtgatgtagtgatattgttggatagcatcactaggctggccagggcccataaccttgtc
attccccccagtggacgtaccctttcaggcggtgtggatcccgctgcattgcataaaccc
aaacggttctttggtgcggcccgtaatatggaagaaggcggtagcctgaccatcttagcc
actgcactaattgaaaccggcagtcgtatggatgatgtaatctttgaagagtttaaagga
accggcaatatggaactgattttagaccgcaaattagccgatcgcaggttgtttccggcc
attgatatacaacgttccggcaccaggcgggaagatttgcttttatccaaagaagagttg
gattatgtctggagccttcgcaaggtcattgccggtatgagttccattgaggcactggaa
agtttactggatcgtttgaaaaatacccgggccaatgatgagatactgcatgattttaag
cccaagacaagggtacaacccctaaaccctaatttagatgtgtcacagccgccgggacaa
aaacgtccctatagaaggaaaatacaggaatag
DBGET
integrated database retrieval system
