KEGG   Desmodus rotundus (common vampire bat): 112296204
Entry
112296204         CDS       T05907                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
dro  Desmodus rotundus (common vampire bat)
Pathway
dro03410  Base excision repair
dro04140  Autophagy - animal
dro04217  Necroptosis
dro04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:dro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112296204 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112296204 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    112296204 (HMGB1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    112296204 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dro03036]
    112296204 (HMGB1)
   03400 DNA repair and recombination proteins [BR:dro03400]
    112296204 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dro04147]
    112296204 (HMGB1)
Chromosome and associated proteins [BR:dro03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    112296204 (HMGB1)
DNA repair and recombination proteins [BR:dro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     112296204 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     112296204 (HMGB1)
Exosome [BR:dro04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   112296204 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 NOA36 HMG_box_5 Nop14
Other DBs
NCBI-GeneID: 112296204
NCBI-ProteinID: XP_024406811
LinkDB
Position
Unknown
AA seq 215 aa
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgctttctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacttatattcct
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgcccaaaaatcaaaggagagcatcctggtcta
tccattggtgatgttgcgaagaagctgggagagatgtggaataacactgctgcggatgac
aagcagccttacgaaaagaaggctgctaagctgaaggagaaatacgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgctgcaaaaaagggagttgtcaaggctgagaaa
agcaagaaaaagaaggaggaggaggaagatgaagaagatgaggaggatgaggaggaagag
gaagatgaagaagatgaagatgaagaagaagatgatgatgacgaataa

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