Desmodus rotundus (common vampire bat): 112297010
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Entry
112297010 CDS
T05907
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112297010 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112297010 (CDC40)
Spliceosome [BR:
dro03041
]
Complex C
Other components
Step II factors
112297010 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WDR54
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
112297010
NCBI-ProteinID:
XP_024407572
UniProt:
K9IMF2
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MSAAIASLAASYGSGSGSESDSDSEGGRCPLPTADSLMHLTKSPSDKPSLAVAVDSAPEV
AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSLDNQVTTKYIGSVEEAEKNQGLTVFETGQKKIEKRKKF
KENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKLEEEKPGEEKTIL
HVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSG
HLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDT
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAV
NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTK
LYSRFKAHDKVCIGAVWHPHETSKVLTCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcgattgcatctctggctgcttcctatggttcaggttcggggtccgaatct
gactcggacagtgaaggcggacggtgtccgctgccaaccgctgactctctcatgcacttg
actaaatcgccttctgacaagccctctctggcagtggcggtggactcggctccggaggtg
gcagttaaggaagatttggagactggagttcaccttgaccctgctgtcaaagaggttcag
tataaccctacctatgagaccatgtttgctcccgagtttggaccagaaaatccctttagg
acacagcaaatggctgcccctagaaatatgctttctggatatgctgaaccagctcatatc
aatgattttatgtttgaacagcaaagaagaacttttgccacatatggttatgcattggac
ccttcattagataatcaagtgactactaagtatattggttctgttgaagaagctgagaaa
aatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaagaggaaaaagttc
aaagagaatgatgcatctaatattgatggttttctgggaccatgggcaaaatacgtggat
gagaaagacgtggccaaaccttccgaagaagaacaaaaagaattggatgaaatcacagca
aagaggcagaaaaaaggcaaactggaagaagagaaacctggggaggaaaagacaatctta
catgttaaagaaatgtatgactaccaaggcaggtcttacctgcacatacctcaggatgtt
ggtgttaatctgcggtcaactgtgccacctgagaaatgttatcttcctaaaaaacaaatt
catgtgtggtctggacacacaaagggcgtcagtgccgtcaggttgttccctctctctggc
catttactgctgtcttgttccatggactgtaaaatcaagctatgggaggtttatggagac
aggcgttgtctgcgaacatttattggtcacagtaaagctgtcagggacatctgctttaat
actgcaggaacgcagttcctcagcgcagcttacgacaggtatcttaagctctgggacaca
gagacaggacaatgtatatcaagattcacaaaccgaaaagtaccctattgtgtcaaattt
aaccctgatgaagataagcaaaatctctttgtggccgggatgtctgacaaaaagattgtg
caatgggacatccgcagtggagaaattgtgcaggaatacgatcggcacctgggagctgtc
aacaccattgtttttgttgatgaaaacaggagatttgtgagcacatctgatgataagagc
ctaagagtttgggaatgggatatccctgtggatttcaagtacatagcagaacccagtatg
cactcgatgcctgcagtgactttgtctccaaatgggaaatggctagcatgccaatcaatg
gacaaccaaatcttaatttttggagcacaaaacagatttagattaaataagaaaaaaatt
tttaagggccatatggtagcaggctatgcttgtcaggtggacttttcaccagacatgagc
tatgtgatttcaggagatggaaatggaaaattaaacatctgggactggaagaccaccaaa
ctctacagccggtttaaagctcatgataaagtgtgcataggcgcggtgtggcaccctcac
gaaacatctaaagtcctaacgtgtggttgggatggtctcattaaattgtgggattaa
DBGET
integrated database retrieval system