Desmodus rotundus (common vampire bat): 112298031
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Entry
112298031 CDS
T05907
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112298031 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dro04121
]
112298031 (TRIM54)
Ubiquitin system [BR:
dro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112298031 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
PHP
Sina_RING
UvrD_C
DUF349
DUF1421
COG2_C
FlgN
Spore_III_AB
zf-RING_11
DUF5799
Motif
Other DBs
NCBI-GeneID:
112298031
NCBI-ProteinID:
XP_024408714
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MNFAVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIESPCPRSSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQKFETLCAVLEERKGELLQALAREQE
QKLQRVRGLIRQYGDHLESSSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEDDEVVFDGEEGSAGPEEERLEGT
DSKPSAKGKE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gaaaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctgtgccgaaagtgcgccaatgacgtcttccaggcctccaaccct
ctatggcaatcccggggctccactactgtgtcttcgggaggccgtttccgctgcccctct
tgcaggcatgaggttgtcctggaccgacatggtgtctacggcctgcagcgaaacctgcta
gtggagaatattatcgagagcccctgcccacgctcctccaggccactgcactccaaggct
gagcagcacctcatgtgcgaggagcatgaagaggagaagatcaacatctactgcctgagc
tgtgaagtgcccacctgctctctctgcaaggtctttggcgcccacaaggactgtgaggtg
gccccactacccaccatttacaaacgccagaagagtgagctcagtgacggcatcgcaatg
ctggtggcgggcaatgaccgtgtgcaagctgtgatcacgcagatggaggaggtttgccag
accatcgaggacaacagccggaggcagaagcagctgctaaaccagaagttcgagactctg
tgcgcagtgctggaggagcggaagggtgagctgctgcaggcactggcgcgggagcaggaa
cagaagctgcagcgcgtcaggggcctcatccgccagtacggagaccacctggaaagctcc
tccaagctcgtggagtctgccatccagtccatggaggagccgcagatggcgctgtatctg
cagcaggccaaggagctcatcaacaaggtcggggcaatgtcaaaggtagagctggcagga
cggcccgagccaggctatgaaagcatggagcagttcaccgtgagcgtggagcacgtggcg
gaaatgctgaggaccatcgacttccagccgggcgcttccggggaggaagaggatgacgag
gtggtgtttgacggagaagagggcagtgcggggccggaagaagagcggctggagggcacc
gattccaagcccagtgccaagggcaaagagtag
DBGET
integrated database retrieval system
