Desmodus rotundus (common vampire bat): 112298352
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Entry
112298352 CDS
T05907
Symbol
SLX4
Name
(RefSeq) LOW QUALITY PROTEIN: structure-specific endonuclease subunit SLX4
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112298352 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dro04121
]
112298352 (SLX4)
03400 DNA repair and recombination proteins [BR:
dro03400
]
112298352 (SLX4)
Ubiquitin system [BR:
dro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112298352 (SLX4)
DNA repair and recombination proteins [BR:
dro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112298352 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112298352
NCBI-ProteinID:
XP_024409065
LinkDB
All DBs
Position
Unknown
AA seq
1895 aa
AA seq
DB search
MMDESDDDFKELCASFFQRVKKNGSKEVSGERKTKKASNSTQTTSKPKRAKPAATKSKTP
QGPRERKTRTGSQATRTRKQGAPKRREREPAPPENGEGSMPAAAVLRESAWGSQTGNPAR
STASASREETVEAAPNSNSQPLPPHMTATVPSPSKPRAAEVVLRRMQQFKRAGPERLKRA
SDGCSLQAALEEDVPEGPREAMMAGNGSGPWLPATESDGAVALALQQEFQQERASAHDGS
LEEKGLFFCQICQKNLSAMNVTRREQHVNWCLDEAEKAPRPTAPQIPECPICGKPFLTPK
SRISHMKKCAVKMEVGPQLLLQAVRLQAAQSEGASGTLAQASSLLGVSGQSRFSPARKSF
SKSSPSQMSHCTLASEPAGHIGDPNXEAFPSGLGFSNHVGGLKRKGAPKKKEPQKRRKVN
EPEVLSEDLQVAMALSRSEMEHAAVPAALTLGTAGSERRRLTTEKRGRKKKAPLSPPQLL
VQDSETTGRQIEDRVAQLFVEEEVELSSTPPLPASRLLKEELGKASRCLQPPEGKQNFLW
EGSALTGAWALESFYTASLVPPVAPQESAKSLTQERPVSPDQPQPGVHMPPALHSTCPRN
PPPSGSQREYQALQDLMDLAREGLSSSQLPSSGALADLGGTTGMDLLPGGLPLTGFVLPA
EEQHLEMGSQASLSLGLLVADFSAMVNNPHLSDVQFQMDSGEVLYAHKFVLYARCPLLIQ
YVNSEGFFAAEDGDLRTQRVLLSDVSTGAARAFLRYLYTADTGLPPQLAPELSSLACRFG
VSELAHLCKQAPVAMDSEGRQWKEKEDEACESRAENFQELLRSIWVGEEEEAEALLKSEG
LEEDKEKVNEAEMEEIYEFAATQRKLLQGERAPEIEEATDQLREDGPTSGQILASIQLNE
QSGNAEQVESSWQGGDEAAAKRKNVGQSKFLPLKGQCSDVGDEAEAPKEALGHTSSCSPS
QGCSAERKEGSFLYSVDVNDYKQPFLSTPGGHPEPSQITSDHKRGNSTVRERAGKNSHPP
TCQQEPPSYPCFVPSQPPPGRSPRQPHPRPHHSRDLSLPIPQSQGRASRAASQDLPSKQR
RGQSLLTLRNHPGCEKGKERGSMSECRNKGVSSEKSPSIDLTQAKPGRWSCRPQNSPSSM
NREDEIILLLDSDEEPELEQTNIKPVFNGSLAEGNVLEVSPKFSDLFSIIDVDADQEPSQ
SPPRRDAPVQWEEGWLSRNQGYVGGRGTPQLFSSPKSSPEDSTTDTSWLVPATPLASRSR
DYSLQTQTLGLRSRTSGYEKAQRKPRAPLESRDGPRATSKFSGIVPQTSSSCPMPVNPRS
PSSPCPRSHQHFSLLAPSPTSGDRTDFSGQFLRHSLPRLSLLNQGTADEVVEVEDSEDEQ
EVASYQASSSPVLDSAPPIPTDDCCWHAEPLSPIPIDSLNLERTGPLSTSSPGGRAGEAP
DSSDCRSPALQGTTPIRGSCIGRRKSQEKSPQPSSPGSSRLSFLNSHLWDDWDGEEQKSP
EVLFLAQTPRADGGQKSEGLEKPKGANRRKNLPPKVPITPMPRYSIMETPVLKKELDRFG
VRPLPKRQMVLKLKEIFQYTHQTLESDSEDENQFSQGPLEASRSQTCAIKTTKESKAAGC
ASLEAPSDPIPQRSKGPAKTKGTRQQKQQPSGSIPHVSPAKVLPLGPDDDAQLPASQEST
ATSVDSSDSSLSSQSSSSEFGVAFESVGEDEEGEKGVSASQAVDVEEAVRCYIRSTPALY
RKVLLYQPFELSELQAELKQQGIRMATGKLLDFLDTNCITFTTAGARKEKFERKKQQPMG
KKRRGRPTDRPIAHSPPMAVSRARVRVCGPLVIQASTHISGLWDHICYPCEIDDGTNMDQ
LPSHSISWSGHWNRPPTGFRALGSSLYWCLLFVSL
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgagtccgatgacgattttaaggaactctgtgccagttttttccaaagggtg
aaaaagaatggctccaaggaagtatcaggggaaaggaagacaaaaaaggcctcaaacagc
actcagacaacaagcaaaccgaaaagagccaaaccagctgctaccaagagcaaaacccct
caaggccctagggagaggaaaacccgaactggcagccaggctacaaggacgagaaaacaa
ggggcacccaagcggcgagagcgtgaaccagctccccctgagaatggggaaggaagtatg
cccgctgctgctgtgctccgggagagtgcgtggggctcccagacaggtaacccagccaga
agcactgccagcgcttccagagaggaaaccgtggaggctgctcctaacagcaactcccag
ccccttcctccccatatgactgcgacggtgccaagtccctccaaaccccgggcggccgag
gtggtcctgcggcgaatgcagcagttcaagagagcaggccccgagcgtttgaaacgtgct
tcagatgggtgctccctccaggctgcacttgaagaagatgtcccagagggccctcgagag
gccatgatggcggggaacgggtctgggccctggctccctgccacagagagcgacggtgca
gtggccttggccctgcagcaggagtttcagcaggaacgagcctccgcacatgacggtagc
ctggaggagaagggattgttcttctgccagatctgtcaaaagaacctctcggctatgaac
gtgacgcggagggagcagcacgtgaactggtgcttggatgaggctgaaaaggcaccgaga
cctactgcacctcagatccctgaatgcccaatttgtggcaagccatttctcaccccaaag
agcagaattagtcacatgaaaaagtgtgcagtgaagatggaggttggcccccagctcctg
ctccaggccgtgcggctgcaggcagctcagtctgagggggcctccggcaccctggcgcag
gcatcgagcctgttgggcgtcagcgggcagtctaggttctctccagccagaaaatctttc
agtaaatcttctccgagccaaatgagtcactgcacgttggcctccgagcccgctggccac
attggtgatccaaactgagaggcctttccttcaggccttggcttcagcaatcacgttgga
ggtctgaaaaggaagggagcccccaagaagaaggagccacagaagaggcggaaggtcaat
gagcctgaggtgctatccgaggacctgcaggtggccatggctctgtcccggtctgagatg
gagcatgcggctgtgcccgcggcgctcacgctgggaactgctggttcggagaggagaagg
ctgacaacagagaagaggggtcgcaagaagaaagcacccctttccccaccccagctgtta
gtccaggactcggagaccacaggaagacagatcgaggatcgtgtggcccagctctttgtg
gaagaggaagtagagttgtccagtacaccaccacttcctgcaagcagacttttaaaggaa
gagctaggaaaggccagcaggtgtctgcaaccacctgaagggaagcagaactttctgtgg
gagggcagcgccctgactggggcctgggccctggaatccttctacacagcaagcctggtg
cctcctgtggcgccccaggagtccgccaagagtctcacgcaggagcgaccagtgtcacct
gaccagccacagccaggtgtgcacatgccacctgctctccacagcacctgtcccagaaac
ccaccgccctctggcagccagagggagtaccaggccctgcaggacctcatggacctggca
agagagggattgagcagcagccagttgcccagcagcggggccctggctgacttgggggga
accacagggatggatctgttgcctggtggccttccactgactgggtttgtcctgccagct
gaggagcagcacttggaaatgggcagccaggcttcgctctccctcggtttgctggttgct
gacttcagtgccatggtcaacaacccgcacctgagtgacgttcagttccagatggacagt
ggggaggtgctgtacgcgcacaagttcgtgctctacgcccggtgcccgcttctcattcag
tatgtaaacagtgaaggattcttcgctgcagaagacggtgacttaagaacccagcgcgtc
ctgctgagtgacgtgagcacgggggctgcccgtgcattcctgcgttatctctacactgcg
gacaccggcctccctccccagctggcccctgagctgagttccctggcctgcaggtttggt
gtgagtgagcttgctcacctgtgcaaacaagcccctgttgcgatggactcagagggcaga
caatggaaggagaaggaagatgaagcttgtgaaagcagagcagagaacttccaagaactc
ttaaggtcaatatgggtaggtgaagaggaggaagcagaagccttgttgaaatctgagggc
cttgaagaagataaagaaaaggttaacgaagcagaaatggaagaaatttatgaatttgca
gctactcagcgaaagctgctccagggggaaagagctccagagattgaggaagcaactgat
cagcttagagaagatggtcccacttccgggcaaatcctagcaagcatccagcttaacgaa
cagtcaggaaatgcagagcaggtggaatcatcttggcagggaggtgatgaggccgccgcc
aaaaggaaaaatgtgggacagtccaagttcctgccactcaagggccagtgttcagacgtg
ggggatgaagcagaggcaccaaaggaagcactgggtcatactagctcctgtagcccttct
cagggctgctcggcagagagaaaggaagggtcctttttgtactcagttgatgtcaatgat
tataaacagccctttttatcaaccccaggaggacaccctgaaccatcccaaataacaagt
gatcacaagagaggcaacagcactgtcagagaaagggcggggaagaactcccaccccccc
acttgccagcaggaacctccatcatatccatgcttcgtcccgtcacagcctcctccaggc
aggagtccccgccaaccacaccctcgccctcatcactcaagagacttgtcgctacctata
ccgcagtcacagggcagagcttccagggcagcctcccaggacttaccatcgaagcagagg
aggggccagagccttctcacgctacgtaaccatccaggctgtgagaagggcaaagaacgt
ggttccatgtcggaatgcagaaataaaggggtctcgtcagaaaagtctccgtccattgac
cttactcaggcaaaacctggccgttggagctgtagacctcagaattctccgtccagcatg
aacagggaagatgagattatccttttattggattcagatgaagagccagagctagaacaa
accaacataaagccagtttttaatggttccctggcagaggggaatgttctagaagtaagc
cccaagttctctgacctgttctccatcatcgatgttgatgcagaccaggaaccttcccaa
agcccaccaaggagagacgccccagtacagtgggaggaggggtggctgtcaaggaaccag
ggctatgtgggtggcagagggaccccccagctgttctctagccccaagagcagccccgag
gacagcaccacagacacctcatggctggtgcctgccaccccacttgccagcagaagccgt
gactactcattgcagacccaaaccttgggcctcaggtccaggacttcaggatatgaaaag
gctcagcgcaagcccagagctccattagaaagcagagatggacccagagccactagtaaa
ttttcaggaattgtgccccagacatcgtcatcctgcccaatgcctgtcaatcctaggagc
ccttctagtccctgccccaggagccaccagcacttttctctgctggccccttctccgacc
tcaggagaccgcactgatttcagtgggcagttcctgaggcactcgctgcctaggctgagc
ctgctgaatcagggcacagcggatgaagtggtggaggtggaagacagtgaagatgaacag
gaggtggcttcatatcaggcgagcagcagccccgtgctggacagcgccccccccattcca
actgatgactgctgttggcacgccgagcccctttcacctatcccaatcgacagtctgaac
ctcgaacggactggccccctgagcaccagtagcccaggtggtagggccggggaggcccca
gacagcagtgactgccgctcccctgcactccagggcaccacccccattcgaggaagctgc
attggccgaaggaagtctcaagagaaatcccctcagcccagctcccctgggagcagcagg
ctgagcttcttgaattcacatctgtgggacgattgggatggagaagaacagaagtctcca
gaggttctttttctggcccagacaccaagagctgatggaggtcagaaatcagaagggtta
gagaagccaaaaggtgctaatcggaggaagaacttgcccccgaaagtacccataacgcca
atgccacggtattccatcatggagaccccggtactaaagaaggaactggataggtttggg
gtgcgccctctgcccaaacgccagatggtcctgaaactgaaggagatattccagtacact
caccagacactggagtcagactccgaggacgagaaccagttctcacaggggcctctggag
gcttctcgcagccagacctgtgccatcaaaaccaccaaggaatcaaaggcagcgggctgt
gccagcctggaggccccttctgaccctattccccaaaggtccaaggggccagctaagacc
aagggcacccgacagcaaaagcagcagcctagtggaagcatccctcacgtgtcaccagcc
aaggtgctgcctctaggccctgatgatgatgcccagctcccagcctcccaggaatccacg
gccacctctgtggacagcagtgacagttccttaagctcacagagttcttccagtgaattt
ggagtggcctttgagtctgtcggtgaagatgaggagggtgagaagggggtcagtgcttcg
caggcagtggacgtggaggaggcagtgaggtgctacatccgctccaccccagccctttac
cgcaaggtcctgctctaccagccctttgagctgtcggagctgcaagcagagctgaagcag
cagggcatccgcatggccacggggaagctgctggatttcctggacaccaactgcatcacc
ttcaccactgctggggcccggaaggaaaagtttgagaggaagaagcagcagcccatgggc
aagaagaggaggggcagaccaaccgaccggcccattgcccactcccctcccatggctgtt
agcagagcccgtgtgagggtgtgtggccctttggtaatccaggcctccacacacatttct
gggctgtgggaccacatctgctacccctgtgaaattgatgacggcaccaacatggatcag
cttccttcccactccatctcctggagtggtcattggaacaggccacccactggatttagg
gcccttggttcctccctctattggtgcctactctttgtctccctttaa
DBGET
integrated database retrieval system
