KEGG   Desmodus rotundus (common vampire bat): 112298936
Entry
112298936         CDS       T05907                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
dro  Desmodus rotundus (common vampire bat)
Pathway
dro03013  Nucleocytoplasmic transport
dro03015  mRNA surveillance pathway
dro03040  Spliceosome
dro05014  Amyotrophic lateral sclerosis
dro05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:dro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112298936 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    112298936 (ALYREF)
   03015 mRNA surveillance pathway
    112298936 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    112298936 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    112298936 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dro03019]
    112298936 (ALYREF)
   03041 Spliceosome [BR:dro03041]
    112298936 (ALYREF)
Messenger RNA biogenesis [BR:dro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     112298936 (ALYREF)
    TREX complex
     112298936 (ALYREF)
Spliceosome [BR:dro03041]
 Complex C
  Other components
   EJC/TREX
    112298936 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112298936 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded RRM_5 DUF5549
Other DBs
NCBI-GeneID: 112298936
NCBI-ProteinID: XP_024409822
LinkDB
Position
Unknown
AA seq 184 aa
MGSGKLPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLK
KAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPAQ
SVNRGGMIRNRGSGGFGGGGGTRRGARGGSRGRGRGTGRSSKQQISAEELDAQLDAYNAR
MDTS
NT seq 555 nt   +upstreamnt  +downstreamnt
atgggcagcgggaaattgccgaaacaacttccagacaagtggcaacatgaccttttcgac
agtggctttgggggaggtgccggtgtggagaccggcgggaagctgctggtgtccaatctg
gattttggagtgtccgacgctgatattcaggagctctttgctgagtttgggacgctgaag
aaggcagccgtgcactacgaccgctccggccgcagcctgggcaccgctgacgtgcacttc
gaacggaaagcagacgccctgaaggccatgaaacagtacaacggcgtccctttggacggc
cgccccatgaacattcagctcgtcacgtcacagatcgacacacagcgcagaccagcacag
agcgtaaacagaggcgggatgatcagaaaccgtggctccggagggttcgggggtggcggc
ggcactcggagaggcgcccgcggaggcagccggggcagaggcaggggcaccggccggagt
tcgaagcagcagatctctgcagaggagttggacgcccagctggacgcttacaatgcgagg
atggacaccagctag

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