Desmodus rotundus (common vampire bat): 112300779
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Entry
112300779 CDS
T05907
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112300779 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112300779 (DHX38)
Enzymes [BR:
dro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112300779 (DHX38)
Spliceosome [BR:
dro03041
]
Complex C
Other components
Step II factors
112300779 (DHX38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
T2SSE
nSTAND_NTPase5
nSTAND3
PhoH
Flavi_DEAD
Microtub_bd
AAA_30
Sigma54_activ_2
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
112300779
NCBI-ProteinID:
XP_024411900
UniProt:
K9J0D8
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MADTNEDTSIHRLEGTDGDSQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASMKRK
EREEKDDGEDRKKSRISSYKDWEESKDDQRDAEEDGSDQSGRSIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDRKKERSRDRDSDRKRDRDERDRSRHSS
RSEREGGSERSRRNEPESPRHRPKDAATPSRSTWEEEDNYGSSRRSQWESPSPTPSYRDS
ERSHRLSSRDRDRSVRSRYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRARREDGEE
GISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQKR
ISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDSAAKVHLMVHNLVPPFLDGRIV
FTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMGVK
KEEEPDKALTEDGKVDYRTEQKFANHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQELL
TIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMG
GNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTD
VLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPIFHIPGRTFPVDILFSKTPQED
YVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQL
PSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQI
YPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLG
VQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS
CDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNN
YSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAA
KLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLA
ELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGSVRST
KIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccaatgaggatacctcgatccatagattggaaggcactgatggggactct
caggttggtggtcttatttgcaagaccaaaagtgcggccagtgagcagcatgtcttcaag
gcccctgctccccgcccttcattgctgggactggacttgttggcttctatgaaacggaag
gagcgagaagagaaagacgatggggaagacaggaagaagtccagaatctcttcctacaag
gactgggaagagagcaaggatgaccagagggatgctgaggaggatggaagtgaccagtct
ggtcgaagtatccgaaaagacagacattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttttgggaacgtagtcggcagagagagcgggagcgccgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggatcggaagaaggagagatcgcgg
gatcgagactctgaccgcaagagagacagagatgagcgggatagaagcaggcacagcagc
agatcggagcgggaaggagggtcggagcgcagcaggagaaatgaaccagagagcccgcga
caccgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggacaactat
ggctcctcgaggcgctcgcagtgggaatcgccctctcctacgccttcctatcgggattct
gagcggagccatcggctgtctagtcgagatcgggataggtctgtgaggagcaggtactca
gacgacacacctttgccaacaccatcctacaaatacaatgagtgggctgatgacagaaga
cacctagggtccactccacgtctgtccaggggccgagcaagacgtgaggatggtgaagaa
ggaatttcatttgacacagaagaggagcggcagcaatgggaggatgaccagaggcaagct
gaccgggattggtacatgatggatgaaggatatgacgagttccacaatcccctggcctac
tcctccgaggactacgtgaggaggcgggagcagcatctgcataaacagaagcagaagcgc
atttcagctcagcggagacagatcaatgaggataacgagcgctgggagaccaaccgcatg
ctcaccagcggggtggtccatcggctagaggtggacgaggactttgaagaggatagtgca
gccaaggtgcacctgatggtgcataacctggtgcctcccttcctggacgggcgcatcgtc
ttcaccaagcagccagagcctgtgattccagtcaaggatgccacttctgacctggccatc
attgctcggaaaggcagtcaaacagtgcggaagcacagggagcaaaaggagcgcaagaag
gctcagcacaaacattgggaactggctggaaccaaactgggagatataatgggtgtcaaa
aaagaggaagagccagataaagcactgacagaagatggtaaagtggactacaggacagag
cagaagtttgcaaatcacatgaagaaaaagagtgaagccagcagtgaattcgcaaaaaag
aagtcaattctggagcagagacagtacctgcccatcttcgctgtgcagcaggaactactc
actattattagagataacagcatcgtgatcgtagttggggagacggggagtggtaagacc
actcagctgacccagtacttgcatgaagatggttacacagactatgggatgattgggtgc
acccagccccggcgtgtggcggccatgtcagtggccaagagagtcagtgaagagatgggg
ggaaaccttggtgaggaggtggggtatgccatccgcttcgaagactgcacttcagaaaac
accttgatcaaatacatgactgatgggatcctgctccgagagtccctccgggaggcagac
ctggatcactacagcgccatcatcatggatgaggcccacgagcgctccctcaacaccgat
gtgctcttcgggctgctccgggaggtggtggctcggcgctcagacctgaagctcattgtc
acatcggccactatggatgcagataaatttgctgccttttttgggaatgttcccatcttc
cacatccctggtcgtaccttccctgttgacatcctcttcagcaagaccccacaggaggat
tacgtggaggccgcagtgaagcagtccttgcaggtgcacctgtcaggggcccctggggac
atcctcatcttcatgcctggccaggaggacatagaggtgacctcagaccagatcgtggaa
catctggaagaactggagaatgcacccgccttggctgtgctgcccatctactcccagctg
ccttctgaccttcaggccaaaatcttccagaaggctccggatggcgttcggaagtgtatc
gttgctaccaacattgccgagacatctctgactgtcgacggcatcatgtttgttatcgat
tctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctgcagatc
taccccatcagccaggccaatgccaaccagaggtcggggcgagccggcaggacgggccca
ggtcagtgtttcaggctctacacccagagcgcctataagaatgagctcctgaccaccacg
gtgccggagatccagaggaccaacctggccaacgtggtgctgctgctcaagtccctgggg
gtgcaggacctgctgcagttccacttcatggacccgccgccggaggacaacatgctcaac
tccatgtatcagctctggatcctcggagccctggacaacacaggtggtctgacctcaact
gggcggctgatggtggagttcccgctggacccagccctgtccaagatgctcattgtatcc
tgtgacatgggctgcagctctgagatcctgctcattgtctccatgctctcagtcccagcc
atcttctacaggcccaagggccgagaggaggagagtgatcaaatccgggagaagtttgct
gtccctgagagtgatcatttgacctacctgaatgtttacctgcagtggaaaaacaataat
tactctaccatctggtgtaatgatcattttatccatgccaaggccatgcggaaggtccgg
gaggtccgggctcagctcaaggacatcatggtgcagcagaggatgagcctggcctcatgt
ggcaccgactgggacatcgtcaggaagtgtatctgtgctgcctatttccaccaggcagcc
aagctcaagggaattggggagtatgtgaatatccggacggggatgccttgccatttgcac
cccaccagctctctctttggaatgggctacaccccagactacatagtgtaccacgagttg
gtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggacggagagtggctggcg
gagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggaaaaccgc
cgacgggccaaagaggaagcctctgccatggaggaagagatggcactggccgaggagcag
ctgcgagcccggcggcaggagcaggaaaagcgcagtcccctgggcagtgtcaggtctaca
aagatctacactcctggtcggaaagagcaaggggagcccatgactcctcgccgcacacca
gcccgttttgggctataa
DBGET
integrated database retrieval system
