Desmodus rotundus (common vampire bat): 112300814
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Entry
112300814 CDS
T05907
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112300814 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dro03019
]
112300814 (EDC4)
Messenger RNA biogenesis [BR:
dro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112300814 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
112300814 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
DUF445
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
112300814
NCBI-ProteinID:
XP_024411958
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNTYNGDLNGLLVPDPLCSGDGTS
ANKPGLRAKPSINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFMGSVA
DLAFAHVNSPQLACLDEAGNLFVWHLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEEGSPMVALLHEDRAEVWNLDMLRSSHSTWPVDVSQIKQGFIMVKGHSTYL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHELKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNQELKMWCTVSWTCLQTISFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVTRCRLRHTEVLPA
EEENDSLGADGNHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFDFPTAFGESRPELGSEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPD
AFMTPSTSLQQIAASPSNSSSSSSSSSSSSSLTAVSAMSSTSAVDPPLPRPPEELTLSPK
LQLDGSLTMNSGSSLQASPRSLLPGLLPGPADKLTPKGPGQVPSAASALSLELQEVEPLG
LRQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEDLEPNSMASAASALHL
LSPRPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETC
SSLTESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTK
VPTPRLPAKDWKTKGSPRTSPKLKKKGKKDDGDSGMESRLTERQVAEPSEDWPALIWQQQ
RELLELRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQ
LQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGHLSTSVATKLTAVE
GSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQIN
DSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRA
EVQHQLHLAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAH
LDCQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVL
LSLIQQLASDLGTRTDLKLSYLEDAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPH
NSLGKAARRLSLMLHGLVTPSLP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctacgggacatcctc
aagctggaccggcccgccggaggccccagtgcagagagccagcggccatctaacacctac
aacggggacctcaatgggctcctggttccagaccctctctgctcaggtgatggtacttca
gcaaacaagcctggtctccgggccaagccatctattaacctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctccacctgcattgggatcttggccaaggaggtagaaatt
gtggccagcagtgactccagcatctcgagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgttgccaagtatgactgggagcagaaatactactatggcaacctgattgctgtg
tccaactccttcttggcctatgccattcgggctgccaacaatggctcggcgatggtgcgg
gtgatcagtgttagcacttcggagcggaccctgctcaagggcttcatgggcagtgtggct
gacctggccttcgctcatgtcaactccccacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcacttggctctggtgaatggcaaaattcaagaagagattttggtccac
atccggcagccagagggtacgccgctgaaccactttcgtaggatcatctggtgcccattc
attcctgaggagagtgaagactgttgtgaggagggtagcccaatggtggcccttttgcac
gaggacagggctgaggtgtggaacctggacatgctccgctctagccacagcacctggcct
gtggatgtcagccagatcaagcagggtttcatcatggtgaaaggccacagcacatacctg
agtgaaggggccctctcacctgatgggactgtcctggctacagcaagccatgatggcttt
gtcaagttctggcagatctacattgaggggcaggatgagcccaggtgtctacatgagttg
aagcctcatgatgggcggcctctctcctgcctcctgttctgtgacaaccataagaaacag
gaccctgaggtccctttctggaggttcctcattactggtgctgaccagaatcaggagctg
aagatgtggtgcacagtgtcctggacctgcctgcagaccattagcttctccccagatatc
ttcagctcagtgagtgtgccgcccagcctcaaagtttgcctggacctctcagcagaatac
ctgattctcagtgacgtgcaacggaaggtcctttatgtgatggagctgctgcagaaccag
gaggaaggccgtgcctgcttcagttccatctctgagttcctactcacccaccctgtattg
agcttcggcatccaggttgtgactcgctgccggctgaggcacacggaagtgctgcctgct
gaggaagaaaatgacagcctaggggctgatgggaaccacggagccggtgccatggagtct
gcagctggtgtgctcatcaagctcttttgtgtgcatactaaggcattgcaggatgtgcag
atccgcttccagccacagctgaaccccgatgtggtcgcccccctccccacccacactgcc
catgaagacttcgatttccccacagcgtttggagaatctcggcccgaactgggctctgag
ggtctgggctcagctactcacggctcccagcctgatctccgacgcattgtggagctacct
gcccccgctgacttccttagtctgagcagtgagaccaagcccaagctgatgacacctgac
gccttcatgacacctagcacctccttgcagcagattgctgcctcccctagtaatagcagc
agcagcagcagcagcagcagcagcagctcctctctcacagctgtatctgccatgagtagt
acctcagctgtggacccccccttgcccaggccacctgaggagctgaccttgagccccaag
ctgcagctggatggcagtctgacaatgaacagtggcagcagcctgcaggcaagcccgcgc
agcctcctgcctggcctgctcccaggtccagctgacaaattaactcccaaagggcctggg
caggtacctagtgctgcctctgcactctccctggagctgcaggaagtggagcctttggga
ctacgccaggcttcccccagccgtacccgttcccctgatgttatctcctcagcttccact
gccctgtcccaggacatccctgagattgcatctgaggccctgtcccgtggctttggctcc
tctgctcctgaggatcttgagccaaacagtatggcctcagctgcctcggcactacacctg
ctgtccccacggccccggccagggcctgagcttggcccccagcttagcttggatggaggc
cctggggacggggatcggcatagtaccccttccctcctggaggccgccttgacccaggag
gccacagcccctgacagccaggtctggcctacagcaccagacattactcgggagacatgc
agcagcctcacagaaagccccaggaatggcctacaggaaaagcacaagagcctggccttc
caccgaccaccttatcacttgctgcaacaacatgacagccaggacgccagtgctgagcaa
agtgaccacgacgatgaagtggccagccttgcctctgctgcagggggctttggcaccaaa
gttcccactccacggctgcctgctaaggactggaagactaagggatcccctcggacctca
cccaagctcaagaagaagggcaaaaaagatgatggggattcagggatggaatcccggctc
acggagcgccaggtggcagagccctctgaggactggccagcactaatctggcaacagcag
agagagctgctggagttgcggcacagccaagaagagctgctacagcgtctgtgcacccag
ctcgaaggcctgcagagcactgtcacgggccacgtagagcgtgccctagagtctcggcat
gaacaggagcaacggcggctagaacgggcactggccgaggggcagcaaaggggtggtcag
ctgcaggaacagctgacacagcagctgtcccaggcactgtcttcagctgtggctgggcgg
ctagagcgcagcatacgggatgagatcaagaagacggtgcctccatgtgtctctaggagt
ctagagcctgtggcaggccatctgagcacctcagtggccaccaagctcacagctgtggaa
gggagcatgaaagagaatatctccaagctgctgaaatccaagaacttgacagatgccatc
gcccgagcagctgcagacacattacaggggccaatgcaggctgcctaccgtgaagccttc
cagagtgtggtgctgcccgcctttgagaagagctgccaggccatgttccagcagatcaat
gatagtttccgactgggcacacaggaatacttgcaacagctagagagccacatgaagagc
cggaaggcacgagagcaggaggcgcgggagcctgtgttggcccagctgcggggtctggtc
agcacgctgcagggtgccactgagcagatggcagccactgtgtccagcagtgttcgggcc
gaggtgcagcaccagctgcacttggcagtgggcagcctacaggagtccattttagcacag
gtacaacgcattgttaagggcgaggtgagtgtggcactcaaggagcagcaggccgctgtc
acctctagcatcatgcaagccatgcgctcagctgctggcacacctgtcccggctgcccat
ctggactgccaggcccagcaagcccatatcttgcagctgctacagcagggccacctcaat
caggccttccagcaggccctgacagctgccgacctgaacctggtgctgtatgtgtgtgaa
actgtggacccaggccaggtttttgggcagccaccctgcccactctcccagcccgtgctc
ctttccctcatccagcagctggcctctgaccttggcactcgaactgacctcaagctcagc
tacctagaagatgctgtgatgcacttggaccacagtgaccctatcactcgggaccacatg
ggctccgtcatggcccaggtgcgccagaagctcttccagttcttgcaggccgaaccacac
aactcacttggcaaagcagcccggcgtctcagcctcatgctgcatggtcttgtgaccccc
agccttccttag
DBGET
integrated database retrieval system
