Desmodus rotundus (common vampire bat): 112305427
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Entry
112305427 CDS
T05907
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform X1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
dro
Desmodus rotundus (common vampire bat)
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dro03009
]
112305427 (LTN1)
04121 Ubiquitin system [BR:
dro04121
]
112305427 (LTN1)
Enzymes [BR:
dro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112305427 (LTN1)
Ribosome biogenesis [BR:
dro03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112305427 (LTN1)
Ubiquitin system [BR:
dro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112305427 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
HEAT_GCN1
HipN
FANCL_C
DUF4784
Motif
Other DBs
NCBI-GeneID:
112305427
NCBI-ProteinID:
XP_024416880
LinkDB
All DBs
Position
Unknown
AA seq
1775 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTFQSDLGYVPAVQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDAEIVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKHLAPYLKSVMGYWLLAQCDTYPPAASAAKDAFTAAFPPSKQP
EAIAFCKDEIASVLQDHLIKETPDSLSDPQTVPEEEREAKFHRVVTCSLLALKKLLCLIP
EHELGSLEERFKSLLSQNKFWKYGKHSVPQIRAAYFELVSALCQRIPHLMRDKASRVSSS
VLLSIDDSDPIVCPALWEAVLYTLTTVEDCWLHVNARKSVFPKLSAVMRDGGRGLAPVIH
PNLLPFVSKLPQSVTDPKLDFFKDFLTSLVAGLSTERIKTSLSECSAVISAFFDCLRFIM
QQNLGEKEIEEMLISDQLIPVIDAVLEDQRLQDGQLFACLAETLSSWEAKADVEKDDETA
HSLEKVLLNFWERLSEICFEKVNEPAADVKSVLGVSNLLQALQQPKSSLKSNKKKVGKVR
FADEMPESPTENKKYVPSEGENSDGWELVAESFLSHNSSDLISPLRKKPLEDLVCRLAGM
SINFVNEQKSEQHLRFLSTLLNSFPSTQVFKMLLGDERQSIVKSKPPEIAELVQKNPAVQ
FLYQKLLGWLNEDQRKDAGFLVDILYSALRCCDDDKERKDVLDDLTEVDLKWNSVLQVIE
KACSSSEKHALVVSWLRGDTLGEKLVTLADRLCNKDLESTVTSEPYFSERWTLLSLVLSQ
HVKRDYLIGEVYVERIITKLHETLSKAKKLSEAENNDSSVSSVCDVAYDYFSSAKGYLLM
PSSEDLLLTLFQLCAQSRGKTHLPDILICKLKNTWLSGMNVLVHQTGCAGPQSTFLRSSA
LWLKDQVQSSPLDIQSLQGLLSTVDDLLSKLLESEDTSLLGVYIAGVMPNSREWEMMRQS
LPVQWLHRPLLEGRLSLNYECFQTDFKERDTKTLPSHLCTSALLSKMILVALKKEIVLEN
NELGKITAELLYSLQWCEELDNPPVFLTGFQEMLEKMNITYDNLCGLGNTSSLLRLLFNR
SMEHGTLWSLIIARLILSRSISSDEVKQHYKRKESFFPLTEGNMHTIQSLCPFLSEEDKK
EFVAQCIPALLAWTQEDLCSTDGGFGHLAILNSCLQTRSIDDAELLHGILKILICWKKDH
EDIFLFSCDLSEVSPEILGVNIEVMRFLSLFLKCCSPLLAESEWDFIMCSMLAWLETTSE
NHALCHVPLVQLFACVSCDLACELSAFFDSTTPDTVDHLPANLISEWTEFFSQGIHSLLL
PLLVTVTGQSKDTSETSFQNAMLKPMCETLTHITKDHLLSHELPARSLAGQKTNLPEHLQ
TLLNTLAPLLLFRSRPVQIAAYHMLYKLMPELPQYDQDNLKSDGDEEEEPALSPPAVLMS
LLSTQEDLLDSILGSVPVGQIVSIKPLSEDFCHVLGYLLTWKLVLTFFKASSSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTCAEAASELSNKEPKTFFTEELQLSIREMTTLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSLQEISSVQTSTQL
FNGMTVKARAATREVMATYTIEDIVIELIIQLPPNYPLGSIAVGSGRRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLVSLKRNEHLVCYIYSLSVMSDFGQENNGR
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcggaccaaggggaacctgaggccttcaaacagtggccga
gctgcagaacttcttgcaaaagaacagggaactgtgccgggatttattggttttggaaca
ttccaaagtgacctaggctatgttcctgctgttcaaggagctgaagaaatcgatagtctt
gtagattctgatttccgaatggtcctgcggaaactttctaagaaagatgtcacaacaaaa
ttaaaagctatgcaagaatttggaaccatgtgtacagagagagatgcagaaattgtaaaa
ggagttcttccatactggccaagaattttttgcaaaatttcacttgaccatgaccgccgt
gttcgagaagccacacagcaagcttttgaaaaacttatcctcaaagttaagaaacacttg
gctccttatttaaaaagcgtgatgggctattggctcctggctcagtgtgacacgtaccca
cctgctgcgtcggcagcaaaggatgccttcacagccgcgttcccccccagcaagcagcct
gaggccatagcgttctgtaaggatgagattgcaagtgtgctgcaggatcatctgataaaa
gaaacgcctgactccctcagtgacccgcaaactgttccagaggaagagagagaagccaaa
ttccaccgggtcgtaacgtgctccttgttggccttgaagaaactgctctgcctcatacca
gagcacgagcttgggtctctggaggagaggtttaagtctcttctgtcacagaacaagttt
tggaagtatggaaaacacagtgtgcctcagatccgtgctgcttatttcgagttagtttct
gctttgtgccagcgtattccacacttgatgagggataaagcatcacgagtgagctcctct
gtcctactcagcattgacgacagtgaccccatcgtgtgccctgccctctgggaggctgtg
ctgtacactctgacgactgtcgaggactgttggcttcatgtaaatgccagaaaaagcgtg
tttcctaagctctcagccgtgatgcgtgatggtggccggggcctggccccagtcatacac
cccaacctgctgccattcgtcagcaagctcccgcagtccgtcacagacccaaagctggac
ttcttcaaagacttcctcacctctctggttgcagggctatcaacagagaggatcaaaacc
agcctctcagagtgctcggcagtgatatctgcgttttttgattgcttacgttttataatg
cagcagaacttaggagagaaagagattgaagagatgctcatcagtgatcagttgattcct
gtgattgatgcagttcttgaagaccaaagattgcaggatgggcaactatttgcctgttta
gcagaaactttaagttcctgggaagccaaagcagatgtggaaaaagatgatgaaactgct
cacagcctggagaaagtgctactaaatttttgggaaagactatcagagatctgttttgag
aaagtgaatgagccagcagctgacgttaagtctgttttgggtgtatctaacctattacag
gcccttcaacagccgaagagctcactgaagtcaaataaaaaaaaagttggtaaggtcagg
tttgctgatgagatgcctgaaagtcctacagagaacaaaaaatatgtcccctcagaaggc
gagaacagtgatggctgggaattagtggctgaatcttttctctcccataatagttcagat
cttatatctccgctgcggaagaaacctttggaagacttagtctgcagactggcagggatg
agtattaattttgtcaatgaacaaaaatcagagcaacacctgaggtttctttccactctg
ctcaattctttcccttcaacccaagtatttaagatgctgctaggtgatgaaaggcagagc
attgtcaaatccaaacctcctgaaatagccgaacttgtacagaagaaccctgcagtgcag
tttttataccagaaactactcggttggctaaacgaagaccaaaggaaggacgctggtttc
ctggtggacattttgtacagtgccctccgttgctgtgacgacgacaaggaaagaaaagat
gtcttggatgatctgactgaggtggatctgaagtggaattcagttcttcaggtcattgaa
aaggcatgttctagttcagagaaacatgccttagtcgtttcttggctgagaggagacacc
ctcggagagaaattggtgaccttagcagatcgtctttgcaataaggacttggaatccaca
gtaacttctgaaccttacttctcggaaagatggactcttttaagcttggtattatcccaa
catgttaaaagagattatttgattggagaagtatatgttgaaagaattattactaaactt
catgaaactttatccaaagcaaagaaattgtcagaagctgaaaataatgactcttcagtg
tcttctgtctgtgatgtggcctatgactatttcagctcagcaaaaggatacttgctcatg
ccatcatctgaagatttattattaactctctttcagctgtgtgctcagagcagaggaaaa
acacatttgccagacattctcatctgtaaactgaaaaacacttggctctccggcatgaat
gtgttggttcatcagacgggctgcgccggcccgcagagcaccttcctgcgctcatctgct
ctgtggctgaaggaccaggtccagtcttcgcctttggacatccaaagccttcaaggcctc
ttgtctactgtggatgatttgctcagtaagcttctggagagtgaagacacctccctcctg
ggagtttacattgcaggtgtcatgccaaacagcagagagtgggaaatgatgagacagtcc
cttcccgtgcagtggctgcacagacctctgttagaaggaagactgagtttgaattatgag
tgtttccaaacagattttaaagaacgagatacaaagacacttcctagccatttgtgtact
tcagcattactgagcaaaatgatattagttgcactgaaaaaggaaatagtcctagaaaat
aatgagcttgggaaaataactgcagagcttctctactccctgcagtggtgtgaagaattg
gacaaccccccggttttcctaactgggtttcaggaaatgcttgaaaaaatgaacattacc
tacgataacttgtgtggacttggtaatacctccagccttttgcgcctgctatttaacaga
tccatggaacacggcactctgtggtctcttattattgctagattgatcctttcccgaagc
atttcatctgatgaagtaaaacagcattataagagaaaagaaagctttttcccactaaca
gagggaaacatgcacaccattcaaagtctctgtccgtttctgtcagaagaagacaagaaa
gaattcgttgctcagtgtatacctgcccttctggcctggacccaggaagatctttgcagt
acagacggaggttttggacatcttgccattttaaattcttgtctgcaaaccagaagcata
gatgatgcagagctattacatggtatattgaaaatcctaatatgctggaagaaagaccat
gaagatatttttcttttcagttgtgatctgtccgaagtgagtccagagatcctgggagtg
aacatagaagtaatgcggttcctctccctgttcctcaagtgctgctcccctctgctggcc
gagagcgagtgggacttcatcatgtgctccatgctggcctggctggagaccacgagtgag
aatcacgcgctgtgccacgtgcctctggtccagttgtttgcctgtgtcagctgcgatctg
gcctgtgagctcagtgcctttttcgattccacaactccagataccgtggaccaccttcct
gcaaatctgatcagtgaatggacagaatttttttcccaaggcatccatagtttgctgtta
cctcttttggttactgttacaggacaaagcaaagatacatctgaaacatcctttcagaat
gcgatgctgaagcccatgtgtgaaacgttaacgcatatcacaaaggatcacctgttgagt
cacgagctccctgcgagatcacttgctgggcagaaaacaaacttgccggagcacctccag
actttgctaaatacactggccccgttactcctcttcaggtctcggccagtgcagattgct
gcctatcatatgctctacaagttgatgccagaattaccacagtatgatcaggataatcta
aagtcagatggagatgaagaggaagaaccagccctgtccccaccagcggtgctgatgtct
ctgctcagcactcaggaggacttgctggacagcatcctggggtctgttcctgtgggacag
atcgtctcaatcaagccgctgagcgaagacttctgccatgtcctgggctacctcctcacc
tggaagttagtactgactttcttcaaagcgtcctcctctcagcttcgggctctgtattcg
atgtacctccggaaaacaaagagtttaaataaactgctctatcacctgttcaggctcatg
ccagaaaatccgacctgtgcagaggcggcttctgagctctctaacaaggaacctaagaca
ttcttcactgaagagctgcagctgagcatccgagaaatgacgactctcccgtaccacatt
ccccacttggcgtgctcagtctaccacatgaccctgaaggacttgcccgccatggtccgg
ctgtggtggaacagcagtgagaagcgggtcttcaacattgtggacaggttcacgagcaag
tacgtcagcagtgtgctctctctccaggaaatttcttctgtgcagaccagcacacagctg
tttaatggcatgacggtcaaagctcgcgctgctactcgagaggtcatggccacttacacc
atcgaggacatagtcatcgagctgataatacagctgcctcccaactacccgctgggctcc
attgctgtggggagtgggcggcgtgtgggcgtagcggtgcagcagtggcgcaactggatg
ctgcagctgagcacctacctcacccaccagaatggaagtatcatggaaggcttagcgttg
tggaaaaacaacgtggacaagcgcttcgagggcgttgaagactgcatgatctgcttttcg
gtcattcacggcttcaactattctcttcccaaaaaagcctgtagaacatgcaagaaaaaa
ttccactcagcctgcctggtgagtctaaaaagaaatgagcatttggtatgttatatatat
tctctatctgtgatgtctgactttggacaagaaaacaatggaagataa
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integrated database retrieval system
