Desmodus rotundus (common vampire bat): 112307149
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Entry
112307149 CDS
T05907
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
dro
Desmodus rotundus (common vampire bat)
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112307149 (YTHDC2)
Enzymes [BR:
dro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112307149 (YTHDC2)
Spliceosome [BR:
dro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
112307149 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
UvrD-helicase
AAA_16
AAA_29
T2SSE
SRP54
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
112307149
NCBI-ProteinID:
XP_024419026
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MSRPSSVSPRPPAPGGGCGVVALERFRYGDQKEMEFPSSLTSTERAFIHRLSQSLGLVSK
SKGKGANRYLTVKKKDGSETAHAMMTCNLTHNTKHAVRSLIQRFPVTNKERTELLPKTER
GNVFAVEAENREMSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENK
VVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQ
TIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAGDSTLSAVTHVIVDEVHERDRFSDFLLT
KLRDLLQKHPTLKLILSSAALDVNLFIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGYT
NKEMLKYKKEKQREEKQQTTLTEWYSAQENTLKSESQRQRTVPNVTEEYDILDDGGDAVF
SQLTEKDVNCLEPWLIKEMDACLSDIWLHKDIEAFAQVFHLILTENVSVDYRHSETSATA
LMVAAGRGFSSQVEQLISMGANVHCKASNGWMALDWAKHFGQNEVVDLLESYSASLEFGN
LDESSLVQKSGSDLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDAGAILIFLP
GYDEIVGLRDRILFDDKRFADNIHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNI
AETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFR
LFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAV
QMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPF
VLPMQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATM
EIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDREN
LVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIR
CCSVVTPVTVLVFCGPARLASNALQESSSFRADGIPIDSSDSEMEDRTTANLASLKLDEW
LNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQ
QPSGIGQRPRPMSSEELPLASSWRSNNSRKSSTDTEFSDESASAERVLMKSPSPALHPPQ
KYKDRGILHPKRSTDDRSDQSSVKSAEDYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFI
MKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEI
GREKSQDWGSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQIGE
QLLQLWERLPMGEKTTTD
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcctagcagcgtctccccgcggccgccggctcccggcggcggctgcggggtt
gtcgctctggagcgcttccgctatggggaccagaaagaaatggaatttccttcttctttg
accagtactgaacgagcctttattcatcgattgagtcagtctcttggtttggtctctaaa
agtaaaggaaagggagcaaatagatacctaactgtgaagaagaaagatggatcagaaaca
gctcatgcaatgatgacctgtaatttgactcataatacaaaacatgctgttaggagccta
attcaaagatttcctgtcaccaataaagaacgtactgaacttctgcctaaaacagaaaga
ggaaatgtgtttgcagttgaagctgaaaaccgggaaatgagcaagacaagtgggcgactc
aacaatggcatacctcagattccagtgaaaagaggagaatccgaatttgattctttcagg
cagtctctgccagtgtttgagaaacaagaagaaattgttaaaataattaaggaaaataaa
gtagttttgattgttggagaaactgggtctggaaagactacacagattcctcagtttctg
ttagatgattgctttaaaaatggtatcccctgccgtatattttgtactcagccaagaaga
ttagcagctattgctgtggctgaaagagttgctgcagagagaagagaaaggattggtcaa
acaattgggtatcagatacgattagaaagcagggtttctccaaagacacttctgacattt
tgcaccaatggggtattgcttcgtacactgatggcaggagatagtacgttgtcagctgtg
acacatgttattgtggatgaagtacatgaaagggatcgatttagtgattttttacttaca
aagttaagagatttgttgcaaaagcacccaactttgaaactaattctctctagtgctgcc
ttggatgtaaatctctttataagatattttggaagttgtccagtgatatatatacaagga
agaccatttgaagtaaaagaaatgtttctggaagatattttaagaactactggatataca
aacaaagaaatgttaaaatacaaaaaggaaaaacagcgagaagagaaacaacaaaccaca
cttacagaatggtattcagcccaagagaatactttgaagtctgaatctcagaggcagaga
actgttccaaatgtgactgaagagtatgacatattggatgatggcggtgatgctgttttc
agtcagttgacagaaaaagatgtgaattgccttgaaccatggttaataaaggagatggat
gcttgtctttctgacatatggttgcataaagatattgaggcctttgctcaggtttttcat
cttattttaactgaaaatgttagtgttgattacagacatagtgaaaccagtgcaacggct
ctgatggttgctgcaggtcgtggcttttccagccaagtagagcagttaattagtatggga
gccaatgtccactgcaaagcatcaaatggctggatggctttagattgggctaaacacttt
gggcagaatgaagttgtggatcttctagaatcttacagtgcttcattggaatttggaaat
ctagatgaaagttctctggttcaaaaaagtggaagtgacctcagtgcagaagatagagag
ctcctgaaagcttatcatcatagttttgatgatgaaaaagtagacttggatttgatcatg
catcttctgtacaatatctgccatagttgtgatgctggtgcaatattaattttcctacct
ggatatgatgaaattgttggattaagggatcgcatcctatttgatgacaagcggtttgct
gacaacatacatagatatcaagtctttatgcttcattcaaatatgcaaacatctgatcaa
aagaaagtattaaaaaacccacctgcaggtgttcgaaaaataatcctttctaccaatatt
gctgaaaccagcatcacagtcaatgatgttgtctttgttattgattctggtaaggtgaaa
gagaaatcctttgatgcgctgaattttgttacaatgctaaaaatggtgtggatttccaaa
gctagtgcaatacaacgaaaaggcagggcagggcgatgtagacctggaatttgtttccgt
ctcttcagtagactccgattccagaatatgttggaatttcagactccagaacttttgaga
atgccattacaggaactttgtttacataccaagctgttagccccagttaattgtcctatt
gctgatttccttatgaaagcaccagaacctccaccagctttaatcgtaagaaatgctgta
caaatgcttaagacaatagatgcaatggatgcatgggaagatctcactgaacttggatat
catttggctgacttgccagtagaaccacatcttggtaaaatggtcctgtgtgctgttgtt
ttaaagtgtctggaccccatccttacaattgcctgcacactagcctatcgagatcctttt
gtcctgccaatgcaggcctctcagaaacgtgcagctatgctttgtaggaaacgattcact
gcaggaactttcagtgatcacatggcgcttctcagagcattccaggcatggcagaaagca
cggagtgatgggtgggagagagccttttgtgaaaagaattttctttcacaagctaccatg
gaaataataataggcatgagaactcaattgcttggtcaacttagagcatcaggttttgtt
agagcacgaggtggtggtgacattcgagatgttaacacaaattccgagaactgggctgtg
gttaaagctgctttggtggcaggcatgtatcctaatttagtccatgtggacagagagaat
ttagtgttgacggggccaaaggagaaaaaagtacgatttcatcccacgtcagttctcagt
cagcctcaatataaaaagattcctccagccaatggtcaagctgcagcaattcaggcactg
cctacagattggcttatttatgatgaaatgaccagagcccatagaatagctaatatcaga
tgctgttcagtagtgacacctgtcacagtattggtattctgtggaccagccaggttggca
agtaatgctcttcaggaatcttcatcctttcgagcagatggtattcctattgacagtagt
gatagtgaaatggaagatagaactactgctaatttggcatctttgaaacttgatgagtgg
ctgaatttcaaactagagcctgaggctgccagtttgttgctgcagctcagacagaagtgg
cacagcttatttttacgccgaatgagagctccatctaaaccttggtctcaagttgatgaa
gctaccatcagagcaattatagctgttttaagcactgaagaacagtctgcaggtttacag
caaccatctgggattggccaaaggccaaggcctatgtcttcagaagaacttcctttggca
tcatcttggaggtcaaataatagtcggaaaagttcaacagatactgaattttctgatgag
tctgcttctgcagaaagagtattgatgaaatctccatctccagcattacacccacctcag
aagtacaaagatcgaggaattttacatcctaaacgaagcactgatgacagatcagatcag
tcttctgtgaagtctgcagaagactacccaagtccttgtgctagtccttctcctccatcc
tcaggaaaggggtcaaaatcaccttcaccaagaccaaacatgcctgttcgatacttcata
atgaagagtagcaatttgagaaaccttgaaatttctcagcagaagggtatttggtctaca
acccctagtaatgaacggaagctaaatcgagccttttgggaaagcagcatggtttacttg
gtattttctgttcaaggatctggacatttccagggattttctaggatgtcttctgagata
ggaagggagaagagccaggactggggctctgctgggctgggaggagtgttcaaggtggag
tggatacgaaaagaaagtcttcccttccagtttgcacaccatttactcaatccttggaat
gacaacaagaaagtccagataagcagagatgggcaggaactagaacctcagatcggggaa
cagctgctacagttatgggaacgccttccaatgggagaaaaaaccacaactgattga
DBGET
integrated database retrieval system
