Desmodus rotundus (common vampire bat): 112309687
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Entry
112309687 CDS
T05907
Symbol
COL6A6
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro04151
PI3K-Akt signaling pathway
dro04510
Focal adhesion
dro04512
ECM-receptor interaction
dro04820
Cytoskeleton in muscle cells
dro04974
Protein digestion and absorption
dro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112309687 (COL6A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112309687 (COL6A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112309687 (COL6A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112309687 (COL6A6)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112309687 (COL6A6)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112309687 (COL6A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dro04147
]
112309687 (COL6A6)
00536 Glycosaminoglycan binding proteins [BR:
dro00536
]
112309687 (COL6A6)
Exosome [BR:
dro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112309687 (COL6A6)
Glycosaminoglycan binding proteins [BR:
dro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112309687 (COL6A6)
Hyaluronan
Extracellular matrix or blood plasma proteins
112309687 (COL6A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
DUF1194
Motif
Other DBs
NCBI-GeneID:
112309687
NCBI-ProteinID:
XP_024421677
LinkDB
All DBs
Position
Unknown
AA seq
2271 aa
AA seq
DB search
MKMLLILFLIIICSCVSINQDSEPEYADVVFLVDSSDHLGTKSFPLVRTFISKMINSLPI
EANKYRVALAQYSDRLHSEFQLNTFKSKNPMLNHLKKNFEFMGGSLQVGNALQEAHRTYF
SGPANGRDKKLFPPILVVLASAESEDDVEEASKALRRDGVRIISVGLQTASEENLKAMAT
AQFHFNLRTVRDLSAFSQNLTQIIKDAAQYKEGAVDDILAEVCQGPSVADVVFLLDMSVN
GSQENLDYLKEFLEESVSALDIKENCMRVGLVAYSNETQVINSLSRGVNKSEVLQSIQSL
FPQDGKAYTGAALRKIREEVFSAQNGSRKNQGVPQIAVLVTHQPSEDNVTKAAANLRRQG
VAVFTLGIEGASESQLEKVASHPAELYVTKLKTFSDLAAHNQTFLKKLRKQITHTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSWNIQATDFQEMKTFLSEVVKMFNIAPQNVRVGAVQ
YADTWDLEFEINKYSNKHDLGKAIENIRQMGGGTHTGAALNFTLGLLQRAKQQRGNRVPC
HLVVLTNGMSEDSILEPASRLREELIHVHAIGIKEANQTQLREIAGEEKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGDENFKKMKTFMKNLVSKSQIGADRV
QIGVVQFSDVNREEFQLNKYMSPSDISDAIDQMGHMGETTMTGSALAFVSQYFSPAKGAR
PTVRKFLILITDGEAHDIVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYIE
NFDILQSIEDDLVFGICSPREDCKRYEVLDVVFVIDSSGSIDNNEYNIMKDFMIDLVKKA
NVGKNQVRFGAMKYADDPEVLFYLDSLDTKSKVISVLQNDQPMGGSTYTAEALGFSDHMF
TEAQGSRLHQGVPQVLIVITDGESHDAEKLNATAKALRDKGILVLAVGIAGANPVELLAM
AGSSDKYFFVETFGGLKGIFSNVSASVCNSSQVDCEIEKVDLVFLLDGSSSIQQEDFKKM
KAFLASLVQDFDVSINRVRVGAAQFSDSYRPEFLLGRFAGKKELSFQIEHIDQLFGNTHI
GAALHNVGHYFQPHMGSRINAGTPQVLLVLTDGQSQDDVAQAAEDLRHKGIDIYTVGIGK
VDDQQLIQITGTASKKLTVQNFDELRKVKKRIIRNICTSGGESNCFVDVVVGFDISTQQM
GQTLLDGQSWVETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSE
NILNSLKDVTVKGPSVLNANFLSSLWDAFQNKSAARGKVVLLFSDGLDDDVETLEQKSDD
LRKEGLNALITVALDGATDSDDLADLLYIEFGKGFEYKTQFTIGMRNLGSQLSKQLVNVA
ERTCCCLFCKCIGEDGTRGDPGPPGNKGSTGFKGSEGYLGEEGVAGERGAAGPMGERGTK
GCNGANGPKGNRGLNGHQGEVGESGIDGLSGIQGDSGLPGRKGDKGDEGSQGSPGKKGIP
GDRGAKGLRGDPGVPGLDNIVEGPKGLKGERGQQGRRGVPGPPGTPGSRSDTAAPGRRGH
TGPQGATGAPGPDGLEGSPGPKGPQGPRGEAGVKGEKGGLGSRGPLGPPGPEGKAGSQGH
LGSQGNKGEPGDLGEKGDVGFAGPRGLPGDDGDPGYGSVGSKGAKGQEGFPGESGSKGEI
GDPGGPGEAGPKGARGLTISAGLPGEPGAPGELGPPGRKGVKGAKGLASFSMCDLIQYVR
DHSPGGYGKPKCPLHPTELVFALDQSQDVTKQEFEQMKAVMSSLVSSIRVRDSGCPVGAR
IAVLSYNSHVRHLIRFSDTYQKNRLLREIEAIPYERSSDGREIGKAMRFISRNVFKRTLP
GTHTRRIATLFSSGQSTDGQSITTATMEFSALDIVPVVIAFSNVPSIKRAFSIDDTGTFQ
VITVPSGADYTPALERLQRCTFCHDVCRPDASCDEARPPPVQSYMDAAFLLDGSRHVGSA
EFEGIRDFLGALLDHFEITPEPETSVTGDRVALLSHAPPSFLPNTQKSPVRTEFNLTTYN
SRRRMKRHVEESVQPLNGDAFIGHALQWTLDNIFLSAPNLRKNKVIFVISAGETSHLDRE
TLKQESLKAKCQGYALFVFSFGPTWNDKELEDLASQPLDHHLVQLGRIHKPDHGYGVKFV
KSFINSIRRAINKYPPINFKTKCNRLSSANLRQPPQQLRSFGPGPHKAALKEDALQKAKF
FQDKKYVSRAARDSRGNTVRNGTRITSRTFKNWKVIKTIPRGQDEGGAQRI
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctgattttgttcctcataataatttgctcctgtgtttctataaaccaa
gattctgagcctgagtatgcagacgtcgtgttcctggtggacagctctgatcacctggga
accaagtccttccctctggtgaggacattcatcagcaagatgatcaacagtctccccatc
gaggccaacaaataccgcgtggccctggcccagtacagcgacaggctccacagtgagttc
cagctgaacaccttcaagagcaagaaccccatgctgaaccacctcaagaagaacttcgag
ttcatgggcggctccctgcaggtgggaaacgctctccaggaggctcacaggacctacttc
tccggcccggccaacgggagagataagaaactgtttcccccgattctggtggtcctggct
tcggccgaatccgaggatgacgtggaggaggcttccaaggctttgcggcgagacggggtg
agaatcatctccgtggggctgcagacagcttccgaggagaacctgaaggccatggccacg
gctcagtttcatttcaacctccggacggtcagggacctcagcgcgttctcccagaacttg
acgcagatcatcaaggacgcggctcagtacaaggaaggagcagtcgatgacattcttgct
gaagtgtgccaaggcccttcagtggctgatgttgtgttcctgttggatatgtccgtcaac
ggcagccaggagaacttggactatcttaaagaattcctagaagaaagtgtatctgctctt
gacataaaggaaaattgcatgagggttggcctcgtggcctacagcaatgagacgcaggtg
ataaactcactgagccggggagtaaataagtcggaggttctccagtctatccagagcctc
tttcctcaggacgggaaggcctacaccggggctgccctcaggaagataagggaggaagtg
ttcagtgcacagaacggcagtcggaagaatcagggggtgccccagattgccgtgctggtg
acccaccagccatcagaagacaacgtgaccaaggcggctgccaaccttcggcgccaggga
gtggccgtcttcaccctgggcatagagggggccagcgagagccagctggaaaaggtcgca
tcacaccctgccgagctgtatgtcaccaaactgaagactttctccgatctggctgcccac
aaccagacatttctgaagaagctacggaagcagataacacacacggtctctgtgttttcc
gaacgaaccgaaaccctcaaatccgggtgtgtggacactgaagaagcagacatctatctg
ctcattgatggatcctggaacatccaggccacagacttccaagaaatgaagacgttccta
tcagaggttgtaaagatgttcaacatcgctccccagaatgtgcgggttggggccgttcag
tacgctgacacctgggatttggaatttgagatcaataaatactccaacaagcatgatttg
ggaaaggccattgagaacatcaggcagatgggtgggggtacgcacacgggcgcagccctg
aatttcaccctggggctgttgcaaagagcaaagcagcagcgaggaaaccgggtgccgtgt
catcttgttgtgctgacaaacggcatgtctgaggatagcatcctggagcctgccagcaga
ttgagagaggagctcatccacgttcacgccatcgggatcaaggaggccaaccaaacacag
ctgcgagagatcgcaggcgaggaaaagagagtgtactatgtgcacgacttcgatgctttg
aaagacataagaaaccaagttgttcaagaaatttgtgctgaagaagcctgcaaagagatg
aaagctgacatcatgtttctggtggacagttctggcagtataggagatgagaactttaag
aaaatgaaaaccttcatgaaaaacctggtgagcaaatctcagatcggggcagatcgggtg
caaatcggcgtagtccagttcagtgacgtcaatagggaggagtttcagctcaacaaatac
atgtccccaagtgacatttcagatgccatagaccaaatgggccacatgggagaaaccacg
atgacgggcagtgccctggcctttgtgtctcagtacttcagtcccgccaagggggcccgg
cccactgtcaggaagtttctcatcctcatcactgacggcgaagctcacgacatagtcaag
gaccccgcggtagcactgcggcaagaaggcatcattatctactccgtgggcgtgtttggc
tccaatgtcacccagttggaggagatcagcgggcggccggagatggttttttatattgag
aatttcgacattctgcagagcattgaagacgatctcgtttttggaatatgcagcccccgg
gaagattgcaagcgatatgaagttttagatgtcgtatttgtaattgacagttctggcagc
attgataataatgaatataatatcatgaaggatttcatgatagacttggtgaaaaaagct
aatgttggcaagaaccaggtccgatttggggcgatgaagtacgctgatgacccggaggtg
ctgttttacctggatagcctcgacacaaaatcaaaggtgatttcagtgctccagaatgac
cagcccatggggggcagcacctacactgccgaggccctgggcttctcggaccatatgttc
accgaagcccagggcagccgtctgcaccaaggggtcccccaagtcctcatcgtgatcacc
gatggcgaatcccatgatgcagaaaagcttaatgccacagccaaggccttgcgagacaaa
ggcattcttgtcctggccgtggggatcgctggtgctaaccccgtggagctgctagccatg
gcagggtcgagcgacaagtacttcttcgtggagacttttggaggcctgaaggggatattt
tcaaatgtgtcagccagtgtgtgtaactcttcacaagtagattgtgaaattgaaaaagta
gatctcgttttcctcctggatggctccagtagcattcagcaggaagacttcaagaagatg
aaggcgttcttggcgtccctcgtgcaagactttgacgtcagcatcaaccgagtgcgcgta
ggggccgcccagtttagcgatagctatcgtccagagtttctcctggggaggttcgcaggc
aaaaaggagctatcctttcagatagaacacatcgatcagctcttcggaaacacgcacatc
ggcgctgcactccacaatgtggggcattacttccagccgcacatgggcagccggataaat
gcaggtaccccacaggtgctgctggtcctcacagacggccagtcccaagatgacgtggct
caggccgctgaagacctgagacacaaaggcatcgacatctacactgtgggcatcgggaag
gtggatgaccagcagcttattcagatcacggggactgcaagtaaaaaacttacagttcaa
aacttcgatgaactgcgtaaggtcaagaagaggataattcgcaacatctgtacctccggc
ggagagagcaactgtttcgtggatgttgtggtaggattcgacatctcaactcagcagatg
gggcagactttgctggacggtcagtcttgggtggaaacctacctgcaagacattttacgt
gccatcagctcccttaatggggttagctgtgaggtgggcacggagacccaggtcagcgtg
gcttttcaagtgaccaacgccatggaaaaatactcacccaagttcgagatctacagtgaa
aacatactgaatagcttgaaggatgtaacagttaaagggccgtctgttctcaacgcaaac
ttcttgagttccctgtgggatgcatttcagaataaatcggctgcccgaggcaaggtggtt
ctcttattttcagatggactggatgatgatgttgaaacacttgaacaaaaatctgatgac
cttagaaaagaaggcctgaatgccctcataactgttgctctggacggagccacagattca
gatgacctggctgatctcctctacattgaatttgggaaaggatttgagtacaagacgcag
ttcactattggaatgaggaatcttgggagccaactgtcaaagcagctggtcaatgttgct
gaaaggacatgctgctgtttattctgcaagtgcattggagaagatggaacaaggggagat
cctggaccccctgggaataagggatccacaggttttaaaggcagtgaaggctacctggga
gaggagggcgttgctggagaaagaggagccgctggaccaatgggagagcgaggtactaag
ggatgcaatggcgccaacggtcctaagggaaacaggggactaaatggacatcagggagaa
gttggggagagtggaattgacggattgagtggcatacagggtgacagtggtcttcctgga
agaaaaggagacaaaggtgatgaaggatcgcagggaagcccaggaaagaaagggattcct
ggagaccgtggagcgaagggcctgcgaggagaccctggagttcctggacttgacaatatc
gtagaaggacccaagggcttgaaaggagaacgtggacaacaaggtagaagaggcgtgcca
ggcccccctggaacaccgggctccagaagtgacacagcagctcctggccgaaggggacat
acaggcccacagggggcaacaggagctccaggcccagatggactcgaaggctcacccggc
cctaagggccctcagggcccaagaggagaggctggtgtgaaaggagaaaaaggaggtctg
ggaagtagaggtcccctggggcctccaggaccagaaggaaaggcggggagtcaaggccat
ttgggaagccaaggaaataaaggagaacctggagatctgggagaaaaaggagacgtgggc
ttcgctggcccccgaggcttgccgggggatgatggcgacccaggttatggtagcgtgggg
agtaaaggagcaaagggacaagaagggttccctggagaaagtggatctaagggtgagatt
ggggaccctggtggtccaggagaagctggacccaagggagccagaggcctgacgatctcc
gctgggcttccaggagaaccaggagcccctggggagctgggaccccctggacgcaagggt
gtgaagggggccaaaggattggcttcattttccatgtgtgatctcattcagtatgtgcgg
gaccacagtcctggcggatacggaaaacccaaatgccccctgcatccaaccgagctggtc
tttgccttagaccagtcgcaggatgtgaccaagcaggagttcgagcagatgaaggcggtg
atgtcctcgctggtgagcagcattcgcgtccgggacagtggctgccccgtgggagcgcgc
atcgcagtcctgtcctacaactcccacgtcagacacctcatccgcttctccgacacctac
cagaagaaccgcctcctcagggaaattgaagccatcccctacgagaggtcctcggacggc
agggagatcggcaaagcaatgaggtttatctccaggaacgtcttcaagcgaacccttcca
ggcacgcacacgagaagaatcgccacacttttcagcagcggtcaatctaccgatggccag
tccatcaccacggccaccatggaattcagtgcccttgacatcgttcctgtcgtgatcgct
ttcagcaacgtgccctccatcaagcgtgcattctcgatcgatgacactggcacattccag
gtcataacggttccatccggggctgactacacgccagcgttggagagactgcagaggtgc
acgttctgccatgatgtatgcaggccagatgcttcctgcgatgaagccagaccgcccccc
gtgcagtcttacatggatgcggcttttcttctggacggctcacggcacgtgggaagtgcc
gaatttgaaggcataagagacttcctgggagcactgttagatcactttgaaatcacccca
gagcctgagacctctgtcactggagacagggtggccctgctaagccatgctccccccagc
ttcctacccaacactcagaagagtcccgtgagaaccgagttcaaccttaccacctacaac
agcaggcgccgcatgaagaggcacgtggaagaatccgtccaaccactaaatggagatgct
tttatcggccatgccttacagtggaccctggacaatatctttttgagtgccccaaatctg
agaaaaaacaaagtcatatttgtgatatctgctggggaaaccagtcacttggacagagaa
accttgaagcaagaatctttgaaagccaaatgtcaagggtatgccttgtttgtattttcc
tttggccctacttggaatgacaaggaactggaagatctagccagccagcccctggatcac
cacttggtccagctcggtcgaattcataaacctgaccacggatatggtgtgaagtttgtg
aagtcttttataaactcaatcaggcgtgcaatcaacaagtacccaccaataaacttcaaa
acaaagtgcaatagactcagctctgcaaatctgcggcagcccccacagcagttgcgaagc
tttggccctggaccacataaagctgcccttaaagaagacgcattacaaaaggcaaaattc
tttcaagataaaaaatatgtttcaagagcagcaagagacagcagaggtaatactgttcga
aatggtaccaggatcacatcccgtacctttaaaaactggaaagtgataaaaactattccc
agaggacaggatgaaggaggtgctcaaagaatttaa
DBGET
integrated database retrieval system