Desmodus rotundus (common vampire bat): 112312818
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Entry
112312818 CDS
T05907
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03015
mRNA surveillance pathway
dro04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112312818 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112312818 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dro03021
]
112312818 (SYMPK)
03019 Messenger RNA biogenesis [BR:
dro03019
]
112312818 (SYMPK)
Transcription machinery [BR:
dro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112312818 (SYMPK)
Messenger RNA biogenesis [BR:
dro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
112312818 (SYMPK)
U7-dependent histone pre-mRNA processing factors
112312818 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
112312818
NCBI-ProteinID:
XP_024425154
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGLGIDVMTTSERVVDLLNQAALITSDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQVDKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKRAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILMLDSDNDGVR
THAIKFVEAFIVTLSPRMADSEVPRRHEHDVSLDRVPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPNNKDARKRPRDDSDSSLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPETMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQSKEEPKEEK
VAKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQQARVKILASLVTQFDSG
LKAEVLAFVLEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQ
KDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLD
LSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVA
APWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSP
ELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLE
KKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDM
KSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNI
LSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHV
RSFTPHQQAHIPNSIMTILEASGKQEPEAKEPPAGPLEEDDLEPLALAPAPAPRPPQDLI
GLRLAQEKALKRQLEEEQKLKPGVVAAPPSSSSSSSSARPGPPQGPPQPEEAMDFREEGP
ECETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLTSKEERSPQILAPAAEDTVK
TPSPAATAVMEEAGEPETKGNS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcagtggggacagcgtcactcgccggagtgtggcgtcacagtttttcacg
caagaggaggggctgggcatcgatgtcatgaccacctcagagagagtggtggacctcctg
aaccaggcagcgctgatcaccagtgattcgaagatcacagtgctcaaacaggtccaggaa
ctgatcatcaacaaagatcccacactgctggacaacttcctggatgagatcatcgccttc
caagtggataagtcgatcgaagtgcgcaaattcgtcatcggcttcatcgaggaggcatgc
aagcgagacatcgagttattgctgaaactgattgcgaacctcaacatgctcttgagggat
gagaatgtgaacgtggtgaagagggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcacgggtcatcagcgagctgcaggaggcctgctgggacatg
gtgtctgccatggctggggacatcattctgatgttggactctgacaacgacggtgtccgc
acccacgccatcaagtttgtggaggccttcattgtcaccctgtcaccccgcatggctgac
tcggaggttccccggcgccacgagcacgatgtcagcctggaccgcgtcccacgggaccac
ccctacatccaatacaatgtgctgtgggaggagggcaaggcagccttggagcagctcctc
aagttcatggtgcaccctgccatctcttccatcaacctgactacggcgctgggctccctg
gccaacatcgcgcgccagaggcccatgttcatgtccgaggtgattcaggcctacgaaacc
ctgcacgccaacttgcccccgacgctggccaagtctcaggtgagcagcgttcgcaagaac
ctcaagttgcacctgttgagcgtgctgaagcacccggcctccctggagttccaggcccag
atcaccacgctgctggtggacctgggcacgccccaggccgagattgcccgcaacatgcct
aacaacaaggatgcccgcaagcggccccgtgatgactcggactcctcactcaagaagatg
aagctggagcccaacctgggggaagatgacgaggacaaggacttggagccaggcccgtcg
gggacctccaaggcatcagcccagatctcaggccagtcagacacagacatcacagctgag
ttcctgcagccgctgctgacgcccgacaacgtggccaatctggtcctcatcagcatggtg
tacctgccggagaccatgcctgcctccttccaagccatctacaccccggtggagtccgcg
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgcg
ggactggggcctggcgtggagcagaccaaacagtccaaggaagagcccaaggaggagaag
gtggcgaagcccgagagcgtcctgatcaagcgacgcctgtcggcccagggccaggccatc
tcggtggtgggctccctgagctccatgtccacgctggaggaggaggccccccaggccaag
agaaggccagagcccatcatccctgtcacccagccccggctggcgggtgccggcgggcgc
aagaaaatcttccgtctgagcgacgtcctgaagcccctgaccgacgcgcaggtggaggcc
atgaagctgggcgctgtgaagcggatcctgcgggccgagaaggctgtggcctgcagcggg
gcagcccagcaggcgcgcgtcaagatcctggccagcctggtgacgcagttcgactcgggc
ctgaaggctgaggtcctggccttcgtcctggaggatgtgcgggcccgcctggacctggcc
ttcgcctggctctaccaggagtacaacgcctacctggcagccggggcctcgggcaccttg
gacaagtacgaggactgcctcatccgcctgctctccggtctacaggagaagcccgaccag
aaggatgggatcttcaccaaggtggttctggaggcaccactgatcacggagagtgccctg
gaggtgattcgcaagtactgtgaggacgagagtcgcacctacctgggcatgtctactctt
cgagacctcatcttcaagcgcccgtcccgccagttccagtacctgcatgtcctgctggac
ctcagctcccacgagaaggacaaggtgcgttcccaggccctgctgttcatcaagcgcatg
tatgagaaggaacagctgcgagagtacgtggagaagtttgccctcaactacctgcagctg
ctggtccaccccaacccgccgtcggtgctgttcggagccgacaaggacacagaggtggca
gcgccctggaccgacgagactgtgaagcagtgtctgtacctctacctggccctcctgccc
cagaaccacaagctgatccacgagctggcagctgtgtacactgaggccatagctgacatc
aagcggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactctcca
gagctgctgctcctggtggaaaactgtcccaagggggcagagacgctggtcacaagatgt
ctgcacagcctcacagataaagtcccaccctccccggagctggtgaagcgggtccgtgat
ctgtaccacaagcggctgccagacgtccgcttcctcatccccgtgctcaatgggctggag
aagaaagaagtgatccaggccctgcccaagctcatcaaactcaaccccattgtggtgaaa
gaggttttcaaccgcctgctgggcacccagcacggtgaagggaactcggccttgtccccc
ttgaaccccggagagcttctgattgcattacacaacatcgactcgtcgaagtgtgacatg
aagtccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggag
gtgctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatg
aggaccgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatc
ctgtcccgcctcatcatgaaacaggtgtggaagtaccccaaggtttgggagggcttcatc
aagtgctgccaacgcaccaagccccagagcttccaggtcatcctgcagctgccaccccag
cagctgggtgcggtctttgacaagtgtccagagctccgggagcccctgctggcccatgtc
cgctccttcaccccccatcagcaagcacacatccccaactccatcatgaccatcctggag
gccagcggcaagcaggagccggaggccaaggagcctcctgcagggcccctggaagaggat
gacctggagcccctggcgctggcaccggctcccgccccccggccccctcaggacctcatc
ggcctacggctggcccaggagaaggccttaaagcggcagctggaagaagaacagaagctg
aagcctggggtcgtggcagcacccccctcttcttcctcatcctcgtcctctgccaggcca
ggccccccccagggccccccccagccggaggaagccatggatttccgggaggaggggcct
gaatgtgagactcccgccatcttcatcagcatggatgacgactcgggactgactgaggcc
gctctgctggactcgagtcttgaggggcccctaccaaaggaggcagcagcgggcgggttg
acgtcaaaggaggagaggagcccccagatcctcgcccccgctgcagaagacaccgtgaag
actcccagccccgccgccactgccgtcatggaggaagccggggagcccgagaccaagggg
aacagctga
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integrated database retrieval system
