Desmodus rotundus (common vampire bat): 112314903
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Entry
112314903 CDS
T05907
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112314903 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dro03019
]
112314903 (PARN)
Enzymes [BR:
dro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112314903 (PARN)
Messenger RNA biogenesis [BR:
dro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112314903 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
112314903
NCBI-ProteinID:
XP_024427278
UniProt:
K9IMX9
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFLAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYINSKYIIKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTVPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
CCPLPEDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMTNYLGSFLSPPKIHVSARSKLIEPFIN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHEEKQIKRKWPEDSWKEVERKRLN
NQCISCALQNHYYRTNSLTAASTVRKRSLSPNQADTGSEARVSEEISDLELKQTESCAES
PLERRKKTKKFKRMKKDHSPAGSISDSSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcataaagtgtaccaggccatagag
gaagcggacttccttgccatcgatggggagttttcaggaatcagtgatgggccctcagtc
accgcattaacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacataaat
tcaaagtatataataaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tccccagatgtcaaatttgtttgtcagagctcaagcattgactttctagcaagccaggga
tttgattttaataaagtttttcgcaatggaattccatatttaaatcaggaagaagaaaga
cagttacgagagcagtatgatgaaaaacgtttgcagtccaacggtgcaggagctctatcg
tatgtgtctcctaacacatcaaaatgtcctgtgacggttcctgaggatcagaaaaaattt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaataagaacttg
gatctagagccatgtacggggttccaaagaaaactaatttatcagactttgagctggaaa
tatcccaaaggcattcacgttgagactttagaaaccgaaaagaaagagcgatacatagtt
atcagtaaagtagatgaagaagaacgtaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgctaattcg
ggaaagcttgttattggacacaatatgctcttggatgttatgcacacagttcatcagttc
tgctgccccctccctgaggacttaaatgaatttaaggagatgacaacatgtgtttttccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcgattaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgaacagctccatgaggcaggc
tatgatgcttatatcacaggattgtgtttcatctccatgacaaactacctaggttcattt
cttagtcctccaaaaattcatgtgtctgccagatcaaaactcattgaaccttttattaac
aagttatttcttatgagagtcatggatattccttatctaaacttggaaggaccagacttg
cagcctaaacgtgatcacgttctccatgtgacattccccaaagagtggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcagatatcttggattgatgatacatca
gcatttgtttctcttagccagcctgagcaagtacaaattgctgtcaataccagcaaatac
gcagaaagctatcggattcagacgtatgctgaatatgtggggaaaaaacacgaggagaag
cagatcaagagaaagtggccagaagatagttggaaggaggttgagagaaagcggttaaac
aatcagtgcatatcctgtgctctgcagaatcactattaccgcaccaatagtcttacagct
gccagcacagtaagaaagagaagtctgagtcccaatcaagcagacactggctcggaggcc
agagtatcggaagagatatctgaccttgaactcaagcagacagagtcctgtgcagaatct
cccttggagagaaggaaaaagactaagaaatttaaaagaatgaagaaggaccattctcca
gcaggaagcatctcggacagctctgccaagctctttgaagttcctgacacgtggtga
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