Desmodus rotundus (common vampire bat): 112315138
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Entry
112315138 CDS
T05907
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112315138 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112315138 (SNRNP200)
Enzymes [BR:
dro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112315138 (SNRNP200)
Spliceosome [BR:
dro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112315138 (SNRNP200)
Complex C
U5 SnRNP specific factors
112315138 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
112315138
NCBI-ProteinID:
XP_024427553
UniProt:
K9J428
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDSQMADVARFCNRYPNIELSYEVVDKDIIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaagcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacccgccgggatgaacccacaggagaggtg
ttatccctggttgggaagctggagggcacccggatgggcgataaggctcaacggaccaaa
ccacagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggatcggcatgac
atcaacaagatgaaggggtacactctgctctcggagggtattgatgagatggtaggcatc
atctataagcccaaaaccaaagagacccgggagacctatgaagtgctgctcagcttcatc
caggctgcccttggggaccagccacgtgatattctttgtggggcagctgatgaagttcta
gcagtcctaaagaatgaaaagcttcgtgacaaggaaaggagaaaggagattgacttgttg
ctagggcagacagatgataccagataccatgtgctagtgaacttgggtaaaaagatcaca
gactacggcggagacaaggaaatccagaatatggatgacaacattgatgagacatatggt
gtgaacgtacagtttgagtctgatgaggaggaaggcgatgaagatgtatatggggaggtt
cgagaagaggcgtctgatgacgacatggaaggggatgaagctgtggtgcgctgcaccctc
tcggctaatcttgtagcctctggtgagctgatgagttctaagaagaaggatttgcaccct
cgggacattgatgcgttctggctacagcggcagctcagtcgcttttacgatgatgccatt
gtgtctcagaagaaggcagatgaagtgttggaaatcttaaagacggccagtgatgatcgg
gagtgtgaaaaccagctggtgctgctccttggtttcaacactttcgattttattaaagtg
ctccggcagcacaggatgatgattttatattgtaccttgctggccagtgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagctgtcaaagtttctc
taccagctccatgaaacagagaaggaggatctgatccgcgaggagcggtccaggagagag
cgagtgcggcagtcccggatggacacggacctggaaaccatggatctggaccagggcggg
gaggcattggctccaagacaggttctggacttagaggacctggttttcacccaggggagc
cacttcatggccaacaaacgctgtcagcttccagatggatcctttcgtcgccagcgcaag
ggctacgaagaagtgcatgtgcctgcactgaagcccaagccctttggttctgaggaacaa
ctgctcccggtggagaagctgcccaagtatgcacaggctggatttgagggcttcaaaacg
ctgaaccgaatccagagtaagctctaccgggccgccctggagacagatgagaacctgctg
ctgtgtgctcccactggggctggtaaaaccaacgtggccctgatgtgcatgctccgggag
atcgggaagcacattaacatggatggcactatcaacgtggacgacttcaagatcatctac
attgctcccatgcggtccttggtgcaggagatggtgggcagctttggaaagcgcctggct
acatatggcatcactgttgcagaactgactggcgaccaccagctgtgcaaggaggagatc
agcgccactcagatcatcgtctgcactcctgagaagtgggacatcattactcgcaagggt
ggggagcgcacctacacccagctcgtgcggctcatcattctggatgagatccatcttctc
catgatgacagaggccctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaagaggatgtaagactcattgggcttagtgccaccctccccaactatgaagat
gtggccacctttctgcgtgttgatcctgccaagggcctcttctactttgacaatagcttc
cgcccagtgcctctggaacagacttatgtaggcatcacagagaagaaagctatcaagcgt
ttccagatcatgaatgagatagtctatgagaagatcatggaacatgcaggaaaaaatcag
gtgttagtgtttgtccactcccggaaggagactgggaagacggccagggccatccgggac
atgtgcctagagaaggacaccctgggtctgtttctgagagagggctctgcctccacagaa
gtccttcggacggaagctgagcagtgcaagaacctggagctgaaggatcttctgccctat
ggctttgccattcatcacgcaggcatgaccagagttgacagaacacttgtagaggatctc
tttgctgataaacacattcaggttttggtttccacagcaactctggcttggggtgtgaat
ctccccgcacatacagtcatcatcaaaggcacccaggtgtatagtccagagaaggggcgc
tggacagaactgggggcactggacattctgcagatgctgggacgtgccggaagaccccag
tatgacaccaagggtgaaggcatactcatcacctctcacggggagcttcagtactacctg
tctctcctcaaccagcagcttcctattgagagccagatggtgtcaaagctgcctgacatg
ctcaacgcggaaatcgtgctgggcaatgtgcagaatgcaaaggatgcggtgaactggctg
ggctatgcctacctgtatatccgaatgctccgatccccaactctgtatggcatctctcac
gatgatctcaagggagacccactgctggaccagcgccgactggatctggttcatactgct
gccttgatgctggacaagaacaatctggtcaagtatgacaagaagacaggcaacttccag
gtgacagaactgggtcgtatagccagccactactacatcaccaatgacacagtgcagacc
tacaaccagctgctgaagcctactctgagcgagattgagcttttcagagtcttctcattg
tcttcagagttcaagaacatcactgtgagagaggaggagaagctggagctgcagaagctg
ctggagagggtgcccatccctgtaaaggagagcatcgaggagcccagtgcgaagatcaat
gtgcttcttcaagccttcatctcacagctgaaattggagggctttgcactgatggccgac
atggtgtatgtcacacagtcggcaggccggttgatgcgggccatctttgaaattgtcctg
aaccggggttgggcacaacttacagataagacgctgaacctctgcaagatgatcgataaa
cgcatgtggcagtccatgtgtccactgcgtcagttccggaaactccccgaggaagtagtg
aagaagattgagaagaaaaacttcccttttgagcgtctgtatgacctgaatcataatgag
ataggggagctcatccgtatgccaaagatgggcaagaccatccacaaatacgtccacctg
ttccccaagttagagctgtctgtgcacctgcagcccatcacacgctccaccctgaaagtg
gagctgaccatcacaccagacttccagtgggatgagaaggtccatggttcatcggaagca
ttctggattctcgtggaggatgtggacagtgaggtgatactgcaccatgagtatttccta
ctcaaggccaagtacgcccaggacgagcacctcattacattctttgtgcctgtctttgaa
ccgctgccacctcagtacttcatccgcgtggtgtctgaccgctggctctcttgtgagacc
cagctccctgtctccttccgacacctgatcctgccagagaagtacccacctcccactgaa
cttctggacctgcagcccttgcctgtgtctgccttgagaaacagcgcctttgagagcctt
taccaagataaatttcctttctttaaccccatccagacccaagtgtttaacacggtgtac
aacagtgacgacaacgtgtttgtgggggcgcccactggcagcgggaagaccatctgtgca
gagtttgccatcctgcgcatgttgctgcagagctcggaggggcgctgtgtctacatcacc
cccatggaggcgctggcagagcaggtgtacatggactggtatgagaagttccaggacagg
ctcagcaagaaggtagtgctcctgacaggcgagaccagcacggacctaaagctcctgggc
aaaggcaacatcatcatcagtacccccgagaagtgggacatcctttctcggcgctggaag
cagcgcaagaacgttcagaacatcaacctcttcgtggtggatgaggtccacctcattggg
ggcgagaatgggcctgttttggaagtgatctgctcccggatgcgctatatctcctctcag
attgagcgacccattcgtattgtggcacttagctcctcactctcgaatgctaaggatgtg
gcccactggctggggtgcagtgccacctccactttcaacttccacccgaatgtgcgccct
gtgcctttggagctgcacatccagggcttcaacatcagtcacacacagactcgtctgctg
tccatggccaagcctgtgtaccatgctatcaccaagcactctcccaagaagcctgtcatt
gtttttgtgccatctcgcaagcagacccgcctcactgcgattgacatcctcaccacgtgt
gcagccgacatccagcggcagaggttcttacattgcactgagaaggatctgatcccatac
ctggagaagctgagtgacagcacactcaaggaaacactgttaaatggggtaggctacctg
cacgaggggctcagccccatggagcgacgcctggtggaacagctcttcagctcaggggcc
atccaggtggtggtagcttctcggagtctctgctggggtatgagcgtggccgcccacctg
gtgatcatcatggacacccagtattacaatggcaagatccacgcgtatgtggactatccc
atctatgacgtgcttcagatggtggggcatgccaaccgacctctgcaggatgacgagggg
cgttgcgtcatcatgtgccagggctccaaaaaggatttctttaagaagtttttgtacgag
ccgttgccagtagagtctcacctggaccactgcatgcatgaccacttcaatgctgagatt
gtcaccaagaccattgagaataaacaggatgctgtggactacctcacctggacttttctg
taccgccgcatgacacagaaccccaactactacaatttgcagggcatctcccaccgtcac
ctgtctgaccacttgtcggagttggtggagcagaccctgagtgacttggagcagtccaag
tgtatcagcatagaggacgagatggacgtggcgcctctgaacctgggcatgattgccgcc
tactattatatcaactacaccaccattgagctcttcagcatgtccctgaatgccaaaact
aaggtgcgggggctcatcgagatcatctccaacgcggccgagtatgagaatatacccatc
cggcaccatgaggacaacctcctgcggcaattggctcagaaggtccctcacaagctgaac
aaccctaagttcaacgacccacacgtcaagactaacctgctcctgcaggctcacctgtcc
cgaatgcagctgagtgctgagctgcagtcagatacagaggagatccttagcaaggcgatc
cggctcatccaggcctgtgtggatgtcctctccagcaatgggtggctaagtcctgctctg
gcagccatggaactggcccagatggtcacccaggccatgtggtccaaggactcctacctg
aaacagctgccacacttcacgtcagagcacatcaaacgttgcacagacaagggagtggag
agtgtttttgatatcatggagatggaggatgaagagcgaaatgcactgcttcagctgtct
gacagccagatggcagatgtggcccggttctgtaaccgctaccctaatatcgagctgtct
tacgaagtggtggacaaggacatcattcgcagtggcgggcccgttgtggtgctggtacag
ctggagcgggaggaggaagtcacgggtcctgtgatagcccctctcttcccacagaaacgt
gaagagggctggtgggtggtgatcggagatgccaagtccaacagtctcatctctatcaag
aggctgaccctgcagcagaaggccaaggtgaagcttgacttcgtggccccggccactggc
gcccacaactacactctgtacttcatgagtgatgcttatatgggatgtgaccaggaatac
aaattcagtgtggatgtgaaagaagccgagacagacagtgactcggattga
DBGET
integrated database retrieval system
