KEGG   Desmodus rotundus (common vampire bat): 112318100
Entry
112318100         CDS       T05907                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
dro  Desmodus rotundus (common vampire bat)
Pathway
dro03440  Homologous recombination
dro03450  Non-homologous end-joining
dro04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:dro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    112318100 (RAD50)
   03450 Non-homologous end-joining
    112318100 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    112318100 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dro03032]
    112318100 (RAD50)
   03400 DNA repair and recombination proteins [BR:dro03400]
    112318100 (RAD50)
DNA replication proteins [BR:dro03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    112318100 (RAD50)
DNA repair and recombination proteins [BR:dro03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     112318100 (RAD50)
    BRCA1-C complex
     112318100 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     112318100 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook SbcC_Walker_B AAA_21 SMC_N AAA_15 DUF1664 DUF7491 AAA_29 DUF2703
Other DBs
NCBI-GeneID: 112318100
NCBI-ProteinID: XP_024430926
LinkDB
Position
Unknown
AA seq 1312 aa
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELVAVQRSMLCTQKGKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVRECQTELKYLKQNKEEACEIRDQITSKEAQLTSSKEI
VRSYESELDPLKNRLREIEQNLSKIMKLDNEIKALESRKTQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLIDCQRVLEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLATQLELDGFERGPFSERQIKNFHRLVRERQEKEEETASQLMSDFEE
KETLKQRQIDEIRDKKIGLGRIIELKSEILSKKQSELKNVKCELQQLEGSSDRILELDRE
LTKAEHELNKAEKNSNVEALKTEVTSLQNEKADLDRIVRKLDQEMEQLNHHTTTRAQLEM
LTKDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFDSDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQGIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKFIQDQQEQIQHLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQISPLETTLDKFQQEKEELICKKNTSIKIIQDKISDIKEKVKNIHGYMKN
IENYIQDGKDDYKKQKETELNKVIAQLSESEKHHEKIHKEMGTMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKRHLKEMGQMQVLQMKNEHQNLEEKIDNIKRNHSLAIGRQKG
YEDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPMTNLDRENIESLALALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVETFYRVKKNVDQCSEIVKCSVTSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagtttcggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacaattttggttggacccaatggggcg
gggaagacgaccattattgaatgcctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcg
cagatccgtctgcagtttcgtgatgtcaatggagaacttgtagctgtgcagaggtctatg
ctgtgcactcagaagggcaaaaagacggaatttaaaaccctggagggagtcatcactcga
acaaagcatggtgaaaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgttattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcgacaggtacgccagacacaaggt
cagaaagtaagagaatgtcaaacagaactaaaatatctgaagcaaaataaggaagaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacgtcttcaaaggaaatc
gtcagatcctatgagagtgaacttgatccactgaagaatcgtctaagagaaattgaacaa
aatctctctaaaataatgaaacttgacaatgaaattaaagccttggaaagccggaagacg
caaatggagaaagataatagtgaactggaacagaagatggaaaaggtttttcaagggact
gatgaacaactaaatgatttgtatcacaatcaccagagaacagtaagggagaaagaaagg
agactgatagactgtcagcgtgtactggaaaaattaaataaagaatcgaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctacaagcagatcgccat
caagaaaacattcgcgctagagattcattaattcagtctttggcaacacagttagaattg
gatggctttgagcgtgggccattcagtgaaagacagattaaaaattttcacagacttgtg
agagagagacaagaaaaggaagaagagactgctagccaactgatgagtgactttgaagaa
aaagaaactctgaaacaaagacagatagatgagataagggataagaaaatcggactggga
agaataattgagctgaagtcagaaatcctcagtaagaagcagagtgagctgaaaaacgtg
aagtgcgaactgcagcagttggaagggtcttcagacaggattctggaactggaccgggag
ctcacaaaagctgaacatgagcttaacaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaacaagtcttcaaaatgagaaagcagatctagacaggatcgtgcgtaaa
ttggaccaagagatggagcagctgaaccatcatacgaccacacgcgcccagttggagatg
ctgaccaaggacaaagctgacaaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaaattcattgttagggtattttcctaacaaaaagcagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacaggcttgctaaattgaacaaggaa
ctagcttctgctgagcaaaataaaaatcatataaataatgagctaaagcgaaaggaagag
cagttgtccaattatgaagacaagctgtttgatgtttgcggtagccaggattttgacagt
gacttagacaggcttaaagaagagattgaaaaatcttcaaaacagcgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggatgaaaaccagtcctgc
tgccccgtctgtcagagagtttttcagacagaagctgaattacaagaagtcatcagtgat
ttacagtctaaactgcggctggctccagacaaactcaagtcaacagaatcagagctaaag
aagaaagaaaagcggcgagacgaaatgctggggcttgtgcccatgaggcaaggcataatt
gatttgaaagagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcctgggtgcgataatgccg
gaggaagaaagtgctaaagtgtgtctgacggatgttacaattatggagagatttcagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctacaaggagtagac
ttggatagaactgttcaacaagtaaaccaggaaaagcaggaaaaacaacacaaattagat
acagtttccagtaagattgaattgaatcgtaagtttatacaggaccagcaggaacagatt
caacacctgagaagtataacaaatgaacttaaatcagagaaacttcagatatccactaac
ttacaacgtcgtcagcaactggaagagcagactgtggaattatccaccgaagttcagtcc
ttatacagagagataaaggatgctaaagaacagataagtcctttggaaaccacactggac
aagttccagcaggaaaaagaagaactaatttgtaaaaaaaatacaagtatcaaaataata
caggataaaataagtgacatcaaagaaaaggttaaaaatattcatggttatatgaaaaac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaccgaactg
aataaagtaatagctcaactgagtgaaagcgagaaacaccacgaaaagatacataaggag
atgggaaccatgagacaagatatcgacacacagaagatacaagaaagatggctgcaggat
aaccttacattaagaaaaagaaatgaagaactaaaagaagttgaagaggaaagaaaacga
catttgaaggaaatgggtcaaatgcaggttttacagatgaaaaatgaacatcagaacttg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggacgaaattattcactttaagaaagaacttcaaaaacctcaatttcgagatgcc
gaggaaaagtatagagagatgatgatagttatgagaacaacagagcttgtgaacaaggat
ctggacatttattacaagacccttgaccaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcatccgtgacctttggcgaagcacctatcgtggacaagatatc
gaatacatagaaattaggtctgatgccgatgaaaacctgtcagcgtccgataagcggcgg
aactacaactaccgcgtggtgatgctgaagggagacacagccttggatatgcgaggacgg
tgcagtgctggacaaaaggtgttggcctctctcatcatccgcctggccctggcggaaacg
ttctgcttgaactgtggcatccttgccttggatgagccgatgacaaatcttgaccgagaa
aacatcgagtctcttgcacttgctctggttgagataataaaaagtcgctcccagcaacgt
aacttccagcttctggtaatcactcacgatgaggactttgtggagctcttggggcgttct
aaatatgtggagacgttctaccgggtcaagaagaacgtcgatcagtgctcagagattgtc
aagtgcagtgttacctccctggggtcttacgtccattaa

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