Desmodus rotundus (common vampire bat): 112318365
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Entry
112318365 CDS
T05907
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro04151
PI3K-Akt signaling pathway
dro04510
Focal adhesion
dro04512
ECM-receptor interaction
dro04518
Integrin signaling
dro04974
Protein digestion and absorption
dro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112318365 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112318365 (COL2A1)
04518 Integrin signaling
112318365 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112318365 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112318365 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112318365 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dro00536
]
112318365 (COL2A1)
Glycosaminoglycan binding proteins [BR:
dro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112318365 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
112318365
NCBI-ProteinID:
XP_024431366
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRLGAPQMLVLLTLLAAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKPGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKIGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGLPGEKGEPG
DDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPAG
PTGKQGDRGETGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDAEVDATLK
SLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagatgctggtgctgctgacgctgctcgccgccgctgtc
cttcggtgtcacgggcaggatgtccagaaggctggcagctgtgtgcaggacgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtgggcaaccg
ggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaagga
ccccctgggcctcagggacctgcaggtgagcaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccccggacctcgtggcagagatggagagcctgggacccctggaaat
cctggcccccccggccctcctggccctcctggtccccctggccttggtggaaactttgct
gcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggcgtaatgcag
ggaccaatgggccccatgggaccgcgaggacctccaggccctgctggtgctcccggccct
caagggtttcaaggcaaccctggtgaaccgggggaacccggcgtgtctggtcccatgggt
ccgcgcggccctccaggcccccctggaaaacctggagacgatggcgaagctggaaagcct
ggaaaacctggtgaaagaggccctcccggccctcagggtgctcgaggcttcccgggaacc
ccaggccttcctggtgtcaaaggtcacagaggttacccaggcctggatggtgctaagggc
gaagctggtgctccgggtgtgaagggcgagagtggttcccctggtgagaatggctctccg
ggcccgatgggtccccgtggtctgcctggcgagagaggacggaccggccctgcaggcgcc
gtgggtgcccggggcaacgacggtcaaccaggccccgcggggcctccgggtcctgtgggt
cctgctggtggtcctggcttccctggggctcctggtgccaagggtgaagctggtcccact
ggtgctcgtggtcccgaaggcgctcaaggtcctcgcggtgaacctggcactcctgggtcc
cccgggccggctggtgcctctggtaaccccggaacagatggaattcctggagccaaaggg
tctgctggtgcccccggcattgctggtgctcccggctttcctgggccacgtggtcctcct
ggccctcaaggtgcaactggtcctttgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaaaggcgaacaaggccccaagggagaacctggccctgcaggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccattggtccccctggagaaagaggtgctcctggcaaccgcggtttccctggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggcctggctggt
cccaagggagccaacggtgaccctggccgacccggagagcctggccttcctggagcccgg
ggtctcactggccgccccggtgatgctggtcctcaaggcaaaattggtccttctggagcc
cctggtgaagatggtcgtcctggacctccaggtcctcagggggctcgcgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaatggcgagcctgggaaagctggtgagaaa
ggactgcccggtgctcctggtctgagaggtcttcctggcaaagatggagagacaggtgct
gcaggcccccctggacctgctggacctgctggtgagcgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaacca
ggagaccagggtgttcccggtgaagctggcgctcctggcctcgtgggccccagaggtgaa
cgaggcttcccaggtgaacgtggctctcctggtgcccagggcctccaggggccccgtggt
cttcccggcactcctggcactgatggacccaaaggtgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcagggcatgcccggtgagaggggagcagctggtatt
tctgggcccaagggagacaggggtgatgttggtgagaaaggccctgagggagcccccggg
aaggacggtggacgaggtctgacaggtcccattggcccccccggacctgctggtgccaat
ggcgagaagggagaagttggccctccaggtcctgcaggaacagctggtgctcgaggcgcc
cctggtgaacgtggagagactgggcctcctggacccgctggattcgcaggtcctcccggt
gctgatggccagccaggtgccaagggtgagcaaggagaggccggccagaaaggtgatgct
ggtgccccaggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccactggattccctgga
gctgctggccgtgtcggacccccgggctccaatggtaaccctggaccccctggtccccct
ggtccttctggaaaagatggtcctaaaggtgctcgaggagacagtggcccccctggccga
gctggtgaccctggcctccaaggtcctgctggactccctggcgagaagggggagcctgga
gatgatggtccctctggtcccgatggtcctccaggtccccagggcctggctggtcagagg
ggcatcgttggtctccccgggcagcgtggtgagagaggatttcctggcctgcccggccca
tcgggtgagcctggcaagcagggagctcctggtgcatctggagacagaggtccccctggc
cccgtgggtcctcctggcctgactggccctgctggtgaacctggacgagagggaagcccc
ggtgctgacggcccccctggcagagatggtgcagctggagtcaagggtgatcgtggtgag
actggtcccctgggtgctcctggagcccctgggccccctgggtctcccggccccgccggc
ccaactggcaagcagggagaccgaggagaaactggtgcgcaagggcccatgggaccggca
ggaccagccggagcccgaggaatcccgggccctcaaggtccccgaggtgacaaaggagaa
actggagaggctggcgagagggggctgaagggacaccgtggcttcactggtctgcagggt
cttcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccctgttggtccctctggcaaagatggtgctaatggaatc
cctggccccatcgggcctcctggtccccgtggacgttcaggcgaaacaggccctgcgggt
cctcccggaaatcctggaccgcctggccctccaggtccccctggccctggcattgacatg
tcagcctttgctggcttaggcgggagagagaaaggtcctgaccccatgcagtacatgcgg
gccgaccaggcagctggcaacctgaggcagcatgacgctgaggtggatgccacactcaag
tccctcaacaaccagattgagagcatccgtagccccgagggctcccgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccctgaatggaagagcggagactactggatc
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaatgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacacatctggtttggagaaaccatcaacggtggcttccacttcagc
tatggagatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaacatcacttaccactgcaagaatagcattgcctacctg
gacgaagcagctggcaacctcaagaaggccctgctcattcagggttccaacgacgtggag
attcgggcggagggcaacagcaggttcacgtataccgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcacccatggacataggcgggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
DBGET
integrated database retrieval system
